ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAAT
TCATAACTGATCCATTATGTTAAGGGAAATGAAATGTAGAAAGATTGGTT
ACATTTCATTTGTTATCAGAGAGACTGAACCAAAATGTCCATTTGTAATT
CTGGTGTGGATTCAGGGTATTTTAGAAATAACAACAGGGTAAAACTTTAA
ATTTTAAAATATTCAACCATCGTCTGCTAAAATGAAAAAAATATGCTACA
TAAATAATGACGTTTAAAATCAGTCTCATGTTCATTCTTTTTCATAAGAA
TCTTACAATCTGACCTCCCTCTAAGATCTTCTATATTGGATTGTTTTCTT
TGTTATCATGATCTACAACTTTGGAGGGCCAAGTATGTGCCCAAAGGAAC
TGATTTGGGAAAGATAGATGCTACCACTGTCAATGATAAATCATTAAACT
AAATTTATAAAACACGTAAAGTATATTGCTTGAAATCACACTCATTTTAG
GGCAATTTTAAGGATATCAATGCAAATATTTTTAAGACCATCTGATGTTA
ATAAATGTGCTTCCTTCAGTCTTCATGATTCCCTGCCCTTTCCTTCTGGA
TAAGTAATACTTTAGATAGTAAGTACCTGGAAAAACCTGGCATTTCCTTT
GATTTAATATCCACCATTGATGGAAAATATAAAGGGACCCCTTGAACCCC
ACTGGGTAGCCCCCGGCCAGGTTCCTGGCTGGAAATAAATTTCCAAATTT
ACTAA

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTAATACCTCACAAACAA
AACCAGCATAAATATCTTTTGAGGCAGCAACAGCAGGGCCTCCAAATTTT
CAGGTACACTGTGTGGAATTTGGAATTCACTTATAATGCAAACATTTACT
GTTTTGCATGCTTGGAAAAGCAGCTAAAGAAATTGTAATTATATCTGTTG
TAAACTTGAAAGTAGGTAGTTAAAATAGACAACACTAAAACCTATGAGAG
TTTTGAAAAAGTCTTAGGGCAGCTTGATTAGATATTGCCTCATTCTATAC
ACTTATTTTCATTACTGATGCACACCATAAATAAAATGTAAGAGTTTATT
TAGAAGATATATAATTTTCATTCTACATGATATGGAGAATTCATGCTGGG
ACTAATTATAATTTTCTATAGTACTAATCAGTTTTATTGTTCTAGATACC
AATATATTAGTAAATGGTTTGAAGCATCAGGGTAAACCTGTTTAGCCAAA
GATAATTCAATATGAAGTCAAGCAAGATTTAATCACAAGTCCAATTGTGG
CACAAACCTTTTTGTTTAATTGGATATTTTCTTTATTTACATTTCAAATG
TTTTTTCCCTTTCCAGGTATCCCCCTTCCGAAGCCCCATATTCCATCACC
CCTCCTCCTGCCTCTATGGGGGTGCTCACTCACTCAGCTACCCACTCTAN

Query= MSMg01no388_j21.b1 MSMg01no388_j21.b1 CHROMAT_FILE:
MSMg01no388_j21.b1 PHD_FILE: MSMg01no388_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:59 2005
         (507 letters)



>mm_chr13_27775031_27775936
          Length = 906

 Score =  911 bits (471), Expect = 0.0
 Identities = 486/491 (98%), Gaps = 1/491 (0%)
 Strand = Plus / Plus

                                                                       
Query: 17  gaattcataactgatccattatgttaagggaaatgaaatgtagaaagattggttacattt 76
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattcataactgatcaattatgttaagggaaatgaaatgtagaaagattggttacattt 276

                                                                       
Query: 77  catttgttatcagagagactgaaccaaaatgtccatttgtaattctggtgtggattcagg 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 catttgttatcagagagactgaaccaaaatgtccatttgtaattctggtgtggattcagg 336

                                                                       
Query: 137 gtattttagaaataacaacagggtaaaactttaaattttaaaatattcaaccatcgtctg 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gtattttagaaataacaacagggtaaaactttaaattttaaaatattcaaccatcgtctg 396

                                                                       
Query: 197 ctaaaatgaaaaaaatatgctacataaataatgacgtttaaaatcagtctcatgttcatt 256
           |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 397 ctaaaatg-aaaaaatatgctacataaataatgacatttaaaatcagtctcatgttcatt 455

                                                                       
Query: 257 ctttttcataagaatcttacaatctgacctccctctaagatcttctatattggattgttt 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctttttcataagaatcttacaatctgacctccctctaagatcttctatattggattgttt 515

                                                                       
Query: 317 tctttgttatcatgatctacaactttggagggccaagtatgtgcccaaaggaactgattt 376
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tctttgctatcatgatctacaactttggagggccaagtatgtgcccaaaggaactgattt 575

                                                                       
Query: 377 gggaaagatagatgctaccactgtcaatgataaatcattaaactaaatttataaaacacg 436
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aggaaagatagatgctaccactgtcaatgataaatcattaaactaaatttataaaacacg 635

                                                                       
Query: 437 taaagtatattgcttgaaatcacactcattttagggcaattttaaggatatcaatgcaaa 496
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 taaagtatattgcttgaaatcacactcattttagggcaattttaaggatatcaatgcaaa 695

                      
Query: 497 tatttttaaga 507
           |||||||||||
Sbjct: 696 tatttttaaga 706


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 906
Length adjustment: 10
Effective length of query: 497
Effective length of database: 896
Effective search space:   445312
Effective search space used:   445312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)