Query= MSMg01no388_n01.b1 MSMg01no388_n01.b1 CHROMAT_FILE:
MSMg01no388_n01.b1 PHD_FILE: MSMg01no388_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:13 2005
(345 letters)
>mm_chr15_80722922_80723666
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Minus
Query: 1 gggataaggtaatcttaaagaatttacataacatcattaagttccagaacactcaaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gggataaggtaatcttaaagaatttacataacatcattaagttccagaacactcaaggca 416
Query: 61 ctgtgatggcttaaatgattcaaaattagattaagagactgctagaggcaaattaatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctgtgatggcttaaatgattcaaaattagattaagagactgctagaggcaaattaatgaa 356
Query: 121 cttaaaaagcaccaaaactaaaaatgattaaaaacagaaagtagaaatggcaattaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cttaaaaagcaccaaaactaaaaatgattaaaaacagaaagtagaaatggcaattaaaat 296
Query: 181 atgtatatatcagaaaaagatctaccacagactttatttttccaagggttgtttaacgta 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 295 atgtatatatcagaaaaagatctaccacagacattatttttccaagggttgtttaacgta 236
Query: 241 catcactgcacccagcttagagtcatttattttatttttggtttttcgagacagggtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 catcactgcacccagcttagagtcatttattttatttttggtttttcgagacagggtttc 176
Query: 301 tctatgtagctcactttgaagagcaggctggccttgaactgagag 345
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 175 tctatgtagctcactttgaagagcaggctggccttgaacagagag 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_n01.g1 MSMg01no388_n01.g1 CHROMAT_FILE:
MSMg01no388_n01.g1 PHD_FILE: MSMg01no388_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:13 2005
(329 letters)
>mm_chr13_52667931_52668659
Length = 729
Score = 524 bits (271), Expect = e-153
Identities = 304/329 (92%), Gaps = 22/329 (6%)
Strand = Plus / Plus
Query: 1 acaacatgtgaagtgttatttgtcagaggatctcaatgaccagaaagtgaagaccatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaacatgtgaagtgttatttgtcagaggatctcaatgaccagaaagtgaagaccatgtc 260
Query: 61 cctgtatcctctcacccatgcccctataacctctcatccatgtccttgtggccccctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtatcctctcacccatgcccctataacctctcatccatgtccttgtggccccctaac 320
Query: 121 ccatgcccctgtgaccccctaactcatgcccctgtgacccctaacccatgcccctgtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgcccctgtgaccccctaactcatgcccctgtgacccctaacccatgcccctgtgac 380
Query: 181 ccttcacccatgaccctgtgacccctcacccatgaccctgtaagccctcacccatgactc 240
|| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ccctcacccatgaccctgtgacccctcatccatgaccctgtaagcc-------------- 426
Query: 241 tgtgacccttcacccatgaccctataacctctcacccatgatcctataacccctcaccca 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 427 --------ttcacccatgaccctataacccctcacccatgatcctataacccctcaccca 478
Query: 301 ttgtgttaggcttttactgctgtgaagag 329
|||||||||||||||||||||||||||||
Sbjct: 479 ttgtgttaggcttttactgctgtgaagag 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
