Query= MSMg01no389_b01.b1 MSMg01no389_b01.b1 CHROMAT_FILE:
MSMg01no389_b01.b1 PHD_FILE: MSMg01no389_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
(533 letters)
>mm_chr13_117095342_117096274
Length = 933
Score = 1004 bits (519), Expect = 0.0
Identities = 528/531 (99%), Gaps = 2/531 (0%)
Strand = Plus / Plus
Query: 5 gaattcgtctcccgggatgagctgtcggctgcaggctacacagcggaaacactcgatgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcgtctcccgggatgagctgtcggctgcaggctacacagcggaaacactcgatgtg 262
Query: 65 gtacaccttagagcgggcgcgcatcacgaagtcgttcttgctgaagcctatgctgcactt 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtacaccttagagcgggcacgcatcacgaagtcgttcttgctgaagcctatgctgcactt 322
Query: 125 ggcgcatttgatcccgtacaacctgaatgaaccggccccggcatgggaagaaaagcacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggcgcatttgatcccgtacaacctgaatgaaccggccccggcatgggaagaaaagcacac 382
Query: 185 acacaca-a-aaaaatgggtgatttcaggcaggttctgtcccaagatggccagagacccg 242
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acacacacacaaaaatgggtgatttcaggcaggttctgtcccaagatggccagagacccg 442
Query: 243 ggccataaacctgacctgcctggaaaaaaaaatagcaatagcaaagttgggcagaatata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggccataaacctgacctgcctggaaaaaaaaatagcaatagcaaagttgggcagaatata 502
Query: 303 gaaacaaccccacccccttcctccctcctcccccttctcttcctctccctccttcttcct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaaacaaccccacccccttcctccctcctcccccttctcttcctctccctccttcttcct 562
Query: 363 taacctcccctttaacaaggggaacctttatggtgaacctctgtgtctgtctaagtttgt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 taacctcccctttaacaaggggaacctttatggtgaacctctgtgtctgtctaagtttgt 622
Query: 423 acctcttagttcaggcactcagcccaaaccaaggaaaatttattgatggattctaaacct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acctcttagttcaggcactcagcccaaaccaaggaaaatttattgatggattctaaacct 682
Query: 483 cgaaccagcctctggtaccagtctcaggattattcttgcaaatacttgcag 533
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cgaaccagcctctggtaccagtctcaggattattcttgcaaatacttgcag 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_b01.g1 MSMg01no389_b01.g1 CHROMAT_FILE:
MSMg01no389_b01.g1 PHD_FILE: MSMg01no389_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
(407 letters)
>mm_chr13_117253356_117254162
Length = 807
Score = 677 bits (350), Expect = 0.0
Identities = 359/362 (99%)
Strand = Plus / Minus
Query: 46 gtatggatagtgtccaggacaataattaattttccccattggtatctaatttgggaaggt 105
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gtatggataatgtccaggacaataattaattttccccattggtatctaatttgggaaggt 748
Query: 106 ggagtttcatgagaaaggttgtctgtgtggccctggctatcctggaacttactctggaga 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ggagtttcatgagaaaggttgtctgtgtggccctggctatcctggaacttactctggaga 688
Query: 166 ctaggctggccacaaaccaaatgatttacctagctctgcctcccaggttctggggactat 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctaggctggccacaaaccaaatgatttacctagctctgcctcccaggttctggggactat 628
Query: 226 agtatgattcactattcctgctatctaattttaatatgttcattattattcaactgttat 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 agtatgattcactattcctgctatctaattttaatatgttcattattattcaactgttat 568
Query: 286 tttaagtttatatttgctaagtttaaatatctgaattgtacttttgttaatgacgttttc 345
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 567 tttaagtttatatttgctaagtttaaatatctgaattgtactcttgttaatgacgttttc 508
Query: 346 attgagtttgaatcatgtcacgtcagtgccacagtatacatgtttacacatgatttatac 405
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 507 attgagtttgaatcatgtcacgtcagtgccacagtagacatgtttacacatgatttatac 448
Query: 406 cc 407
||
Sbjct: 447 cc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
