Query= MSMg01no389_b15.b1 MSMg01no389_b15.b1 CHROMAT_FILE:
MSMg01no389_b15.b1 PHD_FILE: MSMg01no389_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:35 2005
(346 letters)
>mm_chr13_64652602_64653347
Length = 746
Score = 661 bits (342), Expect = 0.0
Identities = 345/346 (99%)
Strand = Plus / Minus
Query: 1 agaacacttcaggtcaatacctgaaaagatcctttccaaaaatgattctaagaatgtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agaacacttcaggtcaatacctgaaaagatcctttccaaaaatgattctaagaatgtatc 318
Query: 61 tctatttatatgctgtggcaccaatgaaaagtcacaaagtcttactcccgattcctcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tctatttatatgctgtggcaccaatgaaaagtcacaaagtcttactcccgattcctcaga 258
Query: 121 aaacaaaggcaacggcgtatgtgcagccctttcctaacaatgtgtagtctcaggagttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaacaaaggcaacggcgtatgtgcagccctttcctaacaatgtgtagtctcaggagttgt 198
Query: 181 gccggctggttttgtgtgtcaacttgacataggctggagttatcacagagaaaggggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gccggctggttttgtgtgtcaacttgacataggctggagttatcacagagaaaggggctt 138
Query: 241 cagttggggaaatgcctccatgagatccagctataaggcattttctcaattagtgatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cagttggggaaatgcctccatgagatccagctataaggcattttctcaattagtgatcaa 78
Query: 301 gggtgggaggccccattgtgggtggtgccatccctgggctggtagt 346
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 77 gggtgggagggcccattgtgggtggtgccatccctgggctggtagt 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_b15.g1 MSMg01no389_b15.g1 CHROMAT_FILE:
MSMg01no389_b15.g1 PHD_FILE: MSMg01no389_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:35 2005
(461 letters)
>mm_chr13_64501041_64501902
Length = 862
Score = 878 bits (454), Expect = 0.0
Identities = 460/462 (99%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 1 aaggtcctcttctgttac-caggatcagcctgtaaccatattcccatcagaagagaagat 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggtcctcttctgttacacaggatcagcctgtaaccatattcccatcagaagagaagat 260
Query: 60 attttaaagaaagacacttgaggtactaggctactaaaacattgaacctcaaagagttaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttaaagaaagacacttgaggtactaggctactaaaacattgaacctcaaagagttaa 320
Query: 120 tgaatggctgaagtcctggagtcagtcagaggaggaacttgcctctcaggaaggaagttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatggctgaagtcctggagtcagtcagaggaggaacttgcctctcaggaaggaagttc 380
Query: 180 acacacttatcagactaccttggagagactggagccgagacaatcataggcaagaatgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacacttatcagactaccttggagagactggagccgagacaatcataggcaagaatgct 440
Query: 240 tgaccaatactgctgagttgcgtatcttctcttggtctgtttaaatctaaccaccatgtt 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaccaagactgctgagttgcgtatcttctcttggtctgtttaaatctaaccaccatgtt 500
Query: 300 ggtgccccaagatggacatttttgtttcttcccaacgtgactttccatgttgaatacatg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgccccaagatggacatttttgtttcttcccaacgtgactttccatgttgaatacatg 560
Query: 360 tgaaaagccatgtctgaggcatgatcctggtgttggggaaacagagacgggaggacttca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaaagccatgtctgaggcatgatcctggtgttggggaaacagagacgggaggacttca 620
Query: 420 gagggcttgagccgcagagtcagcgagagtcacagtctcaga 461
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagggcttgagccgcagagtcagcgagagtcacagtctcaga 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 862
Length adjustment: 10
Effective length of query: 451
Effective length of database: 852
Effective search space: 384252
Effective search space used: 384252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
