XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGAATT
CACTACTATTATTTTGCTAAATGAACAAAATATCAAACTCTTCTCTAAAC
TTACATCTCTCTACCCATAAGTTAATACAGTTCTCAGACCTCCTGGGAGA
AGTATCTCCACACAGGGGATAGTGGTTAATGCTCAACAGACCAGAGTACA
GAGTACTCATCTTAGAGTACAGAGAAGTGTCAGCAGGGTACTTAGCCACA
AATGGGATGTCAGCCATCACCAGTGCCTAAGGCTCTGGGCCCTCTTTGTA
AGATAGAGACGGAAAGACTGTAAAAGACAGAGGTCAGGGAGCACTGGACT
AAGTGATATCTTCTAGTTCTGACAGGACCACCCCTTCTTGATCTCACAGC
AAGTGTTGTTGCTGTACAAGGCCAAATGAGTCAAGATCTAGATGTAGGAG
GGAGGGGCTCGTGAGTTACCATCTCTAACTGATGAGCCATGGACAGTTGG
NTGGCTTGTCGGGGGAAGAAGGTGAGTTTCTTTTTCAAGGGGTATATGGC
CCCCCTAGAAGTTGGGCCATGGTTCCAGTGGGGTAATCCCCACAACCCAG
GAATATTTAACCGGGGGAAAAAAAACAGGAGGCTTAAGGGGGGGTATGGG
AGAATAAAGGGGGTAAAACTTGTGATAAACCTCCTTCTTTTTTTTCTTCC
TCCTCTTTTTTTTTTTCTTTTCCTTTTTATCTCCTCTTCCCCCTTTGTTT
TTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXACTGAAGAGTTCAGGAGAGAGTAGGTGTTCAATAAA
TAGTTGGCAAATGGGTGTTGAAAGGGCACCTATAAATCTTTCTTTCCTCA
CATTGACTCAAACATAGAAAACCGAATGGTAGCCCTGAGGCTAGGAAGGT
TGCCTGGCGTGCCCTCCCAAGGCCTCCCCATTCCAGGTGGTTGAGAAAGC
CTCTTGGCTGCCTCTGCCTCAACCTCAAGGCCTCTTGTTCATCTTTTCTT
CACTCCAGACAGATGCAGATCATATGGATAGGCCCAGAGAGACTTGGGTG
TGAAGAAGACCTGGATCGGAAAAGGCTGGCCAGTTCTCAAGACTTACCCT
TCCCTGAAACTAACTACCTCATTAACAGTCTCTGGAAGCTGCAGATGCTT
CAACTGTACGTGCATCTCAGAACTGGCCCCAGGACTGTGATAATGCACCA
CCATGTACTCTTAGCACAGGGCTACTATGTACTCTTATACATAGTAGCCC
TGTGCTATGTGTACACCTCCGGCTCTCATGATCATGGACAATGAAAAGCA
GAACCCTACATGTGTGCAAATTGGCCAAAGCCTATTACGGCTCACAAAAG
ACAAATCAGCAGTAGCTTAGAGTGGAGCAGAGCTGGATACTTCTTGATGT
ATTTGGAACCAAAATTTGGGATTCAAGATCCTTCCGAAACTGGGTTAAGA
AAGGAGCCTCCGAATGAAAG

Query= MSMg01no393_a11.g1 MSMg01no393_a11.g1 CHROMAT_FILE:
MSMg01no393_a11.g1 PHD_FILE: MSMg01no393_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:47 2005
         (563 letters)



>mm_chr13_48111250_48112216
          Length = 967

 Score = 1046 bits (541), Expect = 0.0
 Identities = 559/567 (98%), Gaps = 4/567 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgaagagttcaggagagagtaggtgttcaataaatagttggcaaatgggtgttgaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgaagagttcaggagagagtaggtgttcaataaatagttggcaaatgggtgttgaaag 260

                                                                       
Query: 61  ggcacctataaatctttctttcctcacattgactcaaacatagaaaaccgaatggtagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcacctataaatctttctttcctcacattgactcaaacatagaaaaccgaatggtagcc 320

                                                                       
Query: 121 ctgaggctaggaaggttgcctggcgtgccctcccaaggcctccccattccaggtggttga 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaggctaggaaggttggctggcgtgccctcccaaggcctccccattccaggtggttga 380

                                                                       
Query: 181 gaaagcctcttggctgcctctgcctcaacctcaaggcctcttgttcatcttttcttcact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaagcctcttggctgcctctgcctcaacctcaaggcctcttgttcatcttttcttcact 440

                                                                       
Query: 241 ccagacagatgcagatcatatggataggcccagagagacttgggtgtgaagaagacctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagacagatgcagatcatatggataggcccagagagacttgggtgtgaagaagacctgg 500

                                                                       
Query: 301 atcggaaaaggctggccagttctc----aagacttacccttccctgaaactaactacctc 356
           ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 501 atcggaaaaggctggccagttctctctcaagacttacccttccctgaaactaactacctc 560

                                                                       
Query: 357 attaacagtctctggaagctgcagatgcttcaactgtacgtgcatctcagaactggcccc 416
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 attaacagtctctggaagctgcagatgcttcaactgtacttgcatctcagaactggcccc 620

                                                                       
Query: 417 aggactgtgataatgcaccaccatgtactcttagcacagggctactatgtactcttatac 476
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggactatgataatgcaccaccatgtactcttagcacagggctactatgtactcttatac 680

                                                                       
Query: 477 atagtagccctgtgctatgtgtacacctccggctctcatgatcatggacaatgaaaagca 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagtagccctgtgctatgtgtacacctccggctctcatgatcatggacaatgaaaagca 740

                                      
Query: 537 gaaccctacatgtgtgcaaattggcca 563
           |||||||||| ||||||||||||||||
Sbjct: 741 gaaccctacaagtgtgcaaattggcca 767


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 967
Length adjustment: 10
Effective length of query: 553
Effective length of database: 957
Effective search space:   529221
Effective search space used:   529221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)