Query= MSMg01no393_h19.b1 MSMg01no393_h19.b1 CHROMAT_FILE:
MSMg01no393_h19.b1 PHD_FILE: MSMg01no393_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:26 2005
(349 letters)
>mm_chr13_12723948_12724695
Length = 748
Score = 586 bits (303), Expect = e-172
Identities = 336/349 (96%), Gaps = 5/349 (1%)
Strand = Plus / Minus
Query: 1 agtattttctggaccagccagataggttagtcagtaaagatgtttgctatcaagcctgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 728 agtattttctggaccagccagataggttagtcagtaaagatgtttgctatcaagc----c 673
Query: 61 tgacggcctgagtttgatccttgggacccacatgagactcaaggttgttctttgacctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgacggcctgagtttgatccttgggacccacatgagactcaaggttgttctttgacctct 613
Query: 121 atctgcatggcatgtctctgcccacacacacacacacacacacacacacacacacagaca 180
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 612 atctgtatggcatgtctctgcccatacacacacacacacacacacacacacacacacaca 553
Query: 181 cacataactgaagaaactaaatgtgtttctaatgtttctaaatgtatttcctcacatgat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catataactgaagaaactaaatgtgtttctaatgtttctaaatgtatttcctcacatgat 493
Query: 241 catagttccaattttcaatactgcttattattgatttccggttctgttggaatagcgtga 300
||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 492 catagttccaattttcaatactgtttattattgatttccagttctgttg-aatagcgtga 434
Query: 301 caggttctgtctcagagctcattcttatggtgtaggtcttgagctgaag 349
||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 433 caggttctgtctcagagctcattcttacggggtaggtcttgagctgaag 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 748
Length adjustment: 9
Effective length of query: 340
Effective length of database: 739
Effective search space: 251260
Effective search space used: 251260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_h19.g1 MSMg01no393_h19.g1 CHROMAT_FILE:
MSMg01no393_h19.g1 PHD_FILE: MSMg01no393_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:26 2005
(195 letters)
>mm_chr13_12563417_12564011
Length = 595
Score = 377 bits (195), Expect = e-109
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1 aggtaacaacttgtttggttttgattctgggtggctcgagcagtcgcgtgcgtgaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtaacaacttgtttggttttgattctgggtggctcgagcagtcgcgtgcgtgaaagat 260
Query: 61 gagatgtggagcgaagtgaattgaaaggggcagtttccaacacagagcagctagatacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagatgtggagcgaagtgaattgaaaggggcagtttccaacacagagcagctagatacac 320
Query: 121 tgcgtggagagatgtggggatcctagtgactctaggcaaacatgggcatccgtgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcgtggagagatgtggggatcctagtgactctaggcaaacatgggcatccgtgtgtgtg 380
Query: 181 tgtgtgtgtgtgtgt 195
|||||||||||||||
Sbjct: 381 tgtgtgtgtgtgtgt 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
