NNNCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAAAGCCATAGGAAGCAATGCTTGGTGAATTCATTTGCATA
CCAATACCCAGAATGCTTTTCCAGCTCACTGCTATTTAATCTAAGTCAGC
TGGTGTCAGAGCCCTGGGAACAACTGAAGAATTTTGACATGCTTCTTTGT
GCATGCATCAAGTTCCTTTTCTGCATGAAGTGCACAGTGAAACCTCAAAT
TTTCATCTTTAATATGAATTTTTCTATAAAGCTTTGAATATTTTAAAATC
CATTTTCAACCTTTCTTTAAACATTCTTATAATACAAGGCTAAAATTACA
ATTTTAATAATCTTTTAATTGATAAGCACATTACATTGAGTCATTTGAAT
GCAAGGAGGAGACTTAGAAGGGAACATTTTTCCATTTTGAGGAGGTCAAA
TGGAAGATAATTTTGGAACTTTGGAAAAATATGTAGGCCTGGTACTTGAA
AGATGATAGTGTGTCCTAAAAGGCAAGGGTGAGAAAAATCTTAGAAAAAT
TAGAATAATGTANACTGACAGCCAGTATGAAGTTGAAAGTTTACATTTTC
TGGAATGAACCAGTGCTAAAGCAAAGTTATTATTAACCCCTGACCGGAAT
AAGATTACATTATGTATTCCAATACCATATATATGTTGCAAAATTTTAAA
GGCCCAATTTTATTCCCCTTGCCATATTAAAAAAAATACCCCCAACTTGG
AAAAAAGGGAGATGAAN

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAT
GGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAGA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGTCT
AAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCT
GGAAATCCGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAG
GATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAA
TGAATTTATGAAATTCCCTAGCCAATGGATGGACCTGGAGGGCATCATCC
TGAGTGAGGTAACACTTTCCCAAAGGAACTCCCCCAAATGTACTCCCTGA
TAAGGGGGAATTACCCCCAAACCTAGGATACCCCCGAATAAAAAACAATT
TCTCAACCCTTGAGACTTCCAAAAAGGAATACCGAATTGGGGAACCTTTG
CCCCCCCCTTAAAAGGAGAAAAAA

Query= MSMg01no394_d21.b1 MSMg01no394_d21.b1 CHROMAT_FILE:
MSMg01no394_d21.b1 PHD_FILE: MSMg01no394_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:33 2005
         (457 letters)



>mm_chr13_80520168_80521024
          Length = 857

 Score =  855 bits (442), Expect = 0.0
 Identities = 451/454 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccaaagccataggaagcaatgcttggtgaattcatttgcataccaatacccaga 63
           |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggaattacgaagccataggaagcaatgcttggtgaattcatttgcataccaatacccaga 598

                                                                       
Query: 64  atgcttttccagctcactgctatttaatctaagtcagctggtgtcagagccctgggaaca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atgcttttccagctcactgctatttaatctaagtcagctggtgtcagagccctgggaaca 538

                                                                       
Query: 124 actgaagaattttgacatgcttctttgtgcatgcatcaagttccttttctgcatgaagtg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 actgaagaattttgacatgcttctttgtgcatgcatcaagttccttttctgcatgaagtg 478

                                                                       
Query: 184 cacagtgaaacctcaaattttcatctttaatatgaatttttctataaagctttgaatatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cacagtgaaacctcaaattttcatctttaatatgaatttttctataaagctttgaatatt 418

                                                                       
Query: 244 ttaaaatccattttcaacctttctttaaacattcttataatacaaggctaaaattacaat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttaaaatccattttcaacctttctttaaacattcttataatacaaggctaaaattacaat 358

                                                                       
Query: 304 tttaataatcttttaattgataagcacattacattgagtcatttgaatgcaaggaggaga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttaataatcttttaattgataagcacattacattgagtcatttgaatgcaaggaggaga 298

                                                                       
Query: 364 cttagaagggaacatttttccattttgaggaggtcaaatggaagataattttggaacttt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cttagaagggaacatttttccattttgaggaggtcaaatggaagataattttggaacttt 238

                                             
Query: 424 ggaaaaatatgtaggcctggtacttgaaagatga 457
           ||||||||||||||| ||||||||||||||||||
Sbjct: 237 ggaaaaatatgtaggtctggtacttgaaagatga 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)