Query= MSMg01no396_c21.b1 MSMg01no396_c21.b1 CHROMAT_FILE:
MSMg01no396_c21.b1 PHD_FILE: MSMg01no396_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:15 2005
(453 letters)
>mm_chr13_51817857_51818707
Length = 851
Score = 679 bits (351), Expect = 0.0
Identities = 409/447 (91%), Gaps = 33/447 (7%)
Strand = Plus / Plus
Query: 7 gaattcatgtgaaatggctaggtgtggcactgtgcactggggaggcagcgatggcaggct 66
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 238 gaattcatgtgaaaaggctaggtgtggcactgtgcactggggaggcagtgatg------- 290
Query: 67 ccgtgtggcttgctgctggatgccagtctacttaacaagctccaggctggttgagagacc 126
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cc-----------------atgccagtctacttaacaagctccaggctggttgagagacc 333
Query: 127 tcgtctcaaaaaaaaaatgaaattttaaaagtggccagcacccaaggaacgtgtcgacac 186
|||||||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct: 334 acgtctcaaaaaaaa--tgaaattttaaaagtggccagcacccaaggaaag-----acac 386
Query: 187 ccaaggttgtcgtcctatgaccccctagccccacataatgaaagtatagtcaattaaatt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccaaggttgtcgtcctatgaccccctagccccacataatgaaagtatagtcaattaaatt 446
Query: 247 ctatccaaaactgggggcttccatctgttcttttttatcagccttaaagctttctattac 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctatccaaaactgggggcttccatctgttcttttttatcagccttaaagctttctattac 506
Query: 307 atttttttttgacgtttccagtgattagtgtaagctacctcaattccccttcaacacctc 366
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 507 attttttt--gacgtttccagtgattagtgtaagctacctcaattccccttcaccacctc 564
Query: 367 cccctacctactccccacccccacgatgctgctgccatctccttgtgctcaattacgtct 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccctacctactccccacccccacgatgctgctgccatctccttgtgctcaattacgtct 624
Query: 427 ttattatgtgtagatgtgaatgtgtga 453
|||||||||||||||||||||||||||
Sbjct: 625 ttattatgtgtagatgtgaatgtgtga 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 851
Length adjustment: 10
Effective length of query: 443
Effective length of database: 841
Effective search space: 372563
Effective search space used: 372563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_c21.g1 MSMg01no396_c21.g1 CHROMAT_FILE:
MSMg01no396_c21.g1 PHD_FILE: MSMg01no396_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:15 2005
(458 letters)
>mm_chr13_51950464_51951321
Length = 858
Score = 750 bits (388), Expect = 0.0
Identities = 397/400 (99%)
Strand = Plus / Minus
Query: 1 tgatgctggtttttcttctcatctgcaggtcctccaaggaagcacagtatgcatgtatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgatgctggtttttcttctcatctgcaggtcctccaaggaagcacagtatgcatgtatag 341
Query: 61 agaccctgggggaacatacactcccgcagagtgtgaaagtgtgcctggaaagttgggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agaccctgggggaacatacactcccgcagagtgtgaaagtgtgcctggaaagttgggcca 281
Query: 121 ggtgggggaacaccagaggtttgtggcacagtacagatggagtctttggacaacaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggtgggggaacaccagaggtttgtggcacagtacagatggagtctttggacaacaagaag 221
Query: 181 tgagggtagcttaagggggtggagctggagtgatggatggctaagctatcagaagtgctt 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 220 tgagggtagcttaagggggtggagctgaagtgatggatggctaagctatcagaagtgctt 161
Query: 241 gtggttgtcacatataacctgggtgagatacctaccacccatattaggccttttacaact 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gtggttgtcacagagaacctgggtgagatacctaccacccatattaggccttttacaact 101
Query: 301 gcttataactccagctccaaggaatacagcactcttctggcctctgcaggcactatactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gcttataactccagctccaaggaatacagcactcttctggcctctgcaggcactatactc 41
Query: 361 aagtacacacacacacacacacacacacacacacacacac 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aagtacacacacacacacacacacacacacacacacacac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
