Query= MSMg01no396_e24.b1 MSMg01no396_e24.b1 CHROMAT_FILE:
MSMg01no396_e24.b1 PHD_FILE: MSMg01no396_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:24 2005
(429 letters)
>mm_chr13_95911611_95912440
Length = 830
Score = 795 bits (411), Expect = 0.0
Identities = 422/429 (98%), Gaps = 7/429 (1%)
Strand = Plus / Plus
Query: 5 gaattctgggccattc----ctttttagtacaggatgacttagagagcaccccgtctgcc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgggcca---agaactttttagtacaggatgacttagagagcaccccgtctgcc 261
Query: 61 tggtgaggggtttatgtcctaattctcacaatacagcatttaccctagcactttaacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggtgaggggtttatgtcctaattctcacaatacagcatttaccctagcactttaacatt 321
Query: 121 ctgcttatggggatttggaaaaagctaaccagggaaccctctaggcaagttcagcttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgcttatggggatttggaaaaagctaaccagggaaccctctaggcaagttcagcttcct 381
Query: 181 ctggcaaaccacaccttgatccttcctgaagccaccaggcagagagttgtagatagatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctggcaaaccacaccttgatccttcctgaagccaccaggcagagagttgtagatagatat 441
Query: 241 ttccagcatggtttcccacccctggagcagagccagactgctgctgggcaagagacttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttccagcatggtttcccacccctggagcagagccagactgctgctgggcaagagacttgt 501
Query: 301 ttgtaatatatatcttttgttcattctttaggaaatagtctccctgtcaatgttatcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgtaatatatatcttttgttcattctttaggaaatagtctccctgtcaatgttatcagg 561
Query: 361 gaatgtcctgtctccaaggttaatgactccatgataatcagagacaggaggcaagagtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaatgtcctgtctccaaggttaatgactccatgataatcagagacaggaggcaagagtgt 621
Query: 421 atctgtgtc 429
|||||||||
Sbjct: 622 atctgtgtc 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_e24.g1 MSMg01no396_e24.g1 CHROMAT_FILE:
MSMg01no396_e24.g1 PHD_FILE: MSMg01no396_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:24 2005
(478 letters)
>mm_chr13_96115533_96116410
Length = 878
Score = 770 bits (398), Expect = 0.0
Identities = 463/492 (94%), Gaps = 16/492 (3%)
Strand = Plus / Minus
Query: 1 catcaggaccaacttggtagaaggaaagaaccgactcctgtgggttgtcctttgacctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 catcaggaccaacttggtagaaggaaagaaccgactcctgtgggttgtcctttgacctct 499
Query: 61 tgcacttagtcacgcaggcgcaggcgcacaccagaataaataaatgcaggttgttgtctc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgcacttagtcaggcaggcgcaggcgcacaccagaataaataaatgcaggttgttgtctc 439
Query: 121 tgacctcttgcactacagcacgcatgctcaagcccatgtaagactaaacaaataaatggt 180
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 438 tgacctcttgcactacagcacgcatgctcaggcccatgcaagactaaacaaataaatggt 379
Query: 181 taaacaacaagaaacttctattgtcctgtccttaacattgctccccatttgttggaaagt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 378 taaacaacaagaaacttctattgtcctgtccttaacattgctccccgtttgttggaaagt 319
Query: 241 gaaatggcaggagtgctcacaataaggacttagttcataattagcactagttattttaat 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gaaatggcaggagtactcacaataaggacttagttcataattagcactagttattttaat 259
Query: 301 agacggtgga-catgcttagtgccagcccagtggcccagggagacgtgtaccccaccccc 359
||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 258 agacggt-gaccatgcttagtgccagcccagtggcccagggagacgtgtaccccgcccct 200
Query: 360 gcac------------gccccttattgtgtctctgccgagctgggatgtcagtctttgtt 407
|| | |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 199 gcccccccccccccgcgccccttattgtgtttctgcagagctgggatgtcagtctttgtt 140
Query: 408 ctttccgtgtgggatggtgaagagcacgaggtaaagagtttggtggacctgggttcaagt 467
||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 139 ctttccgcgtgggttggtgaagagcatgaggtaaagagtttggtggacctgggttcaagt 80
Query: 468 c-tgctgaacta 478
| | ||||||||
Sbjct: 79 cct-ctgaacta 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
