GCTCTCTATTCGACTCACTATTTTCCGAGGATCCGCGGAATTCTCTGAGT
TCCTCCTGTTATTGAATTTCATGCCATATACTCAAGACCTTTGCATACAA
TTACCATAATATCTGACATATCCCTGAATGTCTAATGATCTCTGGCCCAA
TTCAAAACCATCTGAGTGGGTCTTCTTAAAGCTCATCTGGCAAGGAATGG
GCTATAAACCATCTGAACACAGGAACTCCTATCTGAGATGCCAAGGCATC
TTGTAGAGAATTGCTTCAAACTGATTCATCCATTCAGTGACGGTTCAGTT
ATGATTAATCTTTTTATATGTGTTGACGGTATCTTATACTCGTATCTTCT
TACCGTTGACTACCATCGTTCACTCTTAGAGCGCATCCTTTTCGATTATT
TACCCCCCCCCTTCGCATTATTGTCCCATATTACTCGATTTATCTCTCCT
TCATCCATACATCTAATTTCTTTTCCCCTTTTACCCTTATCCTCCTTTCA
TTTCCCACTCATTTTCCTTTCTTATTTCACCTCTATTTCCGCTTCTTTCA
CTTCTTTTGACCTTTATCCCCCCTTTCCCTTCCTTTTCCTCTTTCCCTTT
CCCCTTTATTTTTTTCTTAACTTCCCCTTTTACTTCCCTTATTTGTCTTC
CCTTCCCTTTTTTTTCACCTTTACCCTCTTCCCTTTTTTCCCCTTTTCCC
TCTTCCCGTTTCTAATCATCCCCTTTTTTCGCTTCCCTTTTTCCTACATC
ATCC

GGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCCCAGGGCAAGTGCACTGTGGATTTGAAGATGACTC
AGGAGACCAGTGGAGGAGATGAGTCAACTTGGAGGTCACTCACATGGTAG
CAGTCAGCCACATAGTAAGGAGGGGAACATTATAGGAATAATAAGGAAGT
TAAGAATATTAGAAAAATTTAAAAGAAAAGCCCCAGGGCAGGTAAGCTGT
AAATCATAAAACTTCCCCTGAAGAGGGAAAATGCTCTATATGTTTGTGAT
AAACTGGTGTTGTATTTCAGCACTGGATATCAGCACAATGAGGGCGAGGT
GTGTGTGTGTGTGTGTGTGTGAGTGCGTGTTTTCATTTTCCTTTTTATTT
TTTTCCCCCCCCCTTTTATATTTTTTTTTTCCATTTATTTTCTTCCCCTA
TATTTTTTTTCTTTATTCATCTTTCTTATCTTCTTACATTCTTCCCTCAT
TTTTACCCATTATGTTCCTTCTCTCTCCGATTTCCTTCATTTCTTTCTCT
TCTTATTTTTATTATCTAATATCTGTCTTCGATTTCTTGTTCCTCTTATC
TTTTTTCCTCTTCCCTCTATCTTTTTTCTTTTCTCATATCTCTCCCCCCA
TTTTTCCTGTCTCTTTTTTAACTTCGATTCCTTCTTACCTCCTGTTTCGT
CTAATTCTACCCCTTTACTTTCTCCCTATCCTTTTATTCCCCCTTTCTTC
TTCTCTAATCCTCACTCTCTCATATTCCTCCCGCTCTATTTTTCCTTAAT
ATTACTCCCCACATTTCTCTTATATCTATN

Query= MSMg01no396_p12.b1 MSMg01no396_p12.b1 CHROMAT_FILE:
MSMg01no396_p12.b1 PHD_FILE: MSMg01no396_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:14 2005
         (134 letters)



>mm_chr13_11810971_11811504
          Length = 534

 Score =  238 bits (123), Expect = 1e-67
 Identities = 129/131 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattgaatttcatgccatatactcaagacctttgcatacaattaccataatatctgacat 60
           ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tattgaattccatgccatatactcaagacctttgcatacaattactataatatctgacat 260

                                                                       
Query: 61  atccctgaatgtctaatgatctctggcccaattcaaaaccatctgagtgggtcttcttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccctgaatgtctaatgatctctggcccaattcaaaaccatctgagtgggtcttcttaa 320

                      
Query: 121 agctcatctgg 131
           |||||||||||
Sbjct: 321 agctcatctgg 331


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 534
Length adjustment: 8
Effective length of query: 126
Effective length of database: 526
Effective search space:    66276
Effective search space used:    66276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no396_p12.g1 MSMg01no396_p12.g1 CHROMAT_FILE:
MSMg01no396_p12.g1 PHD_FILE: MSMg01no396_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:14 2005
         (245 letters)



>mm_chr13_11987719_11988363
          Length = 645

 Score =  458 bits (237), Expect = e-133
 Identities = 243/245 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cccagggcaagtgcactgtggatttgaagatgactcaggagaccagtggaggagatgagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 445 cccagggcaagtgcactgtggatttgaagatgactcaggagaccagtggaggagatgagc 386

                                                                       
Query: 61  caacttggaggtcactcacatggtagcagtcagccacatagtaaggaggggaacattata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caacttggaggtcactcacatggtagcagtcagccacatagtaaggaggggaacattata 326

                                                                       
Query: 121 ggaataataaggaagttaagaatattagaaaaatttaaaagaaaagccccagggcaggta 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 ggaataataaggaagttaagaatattagaaaaatttaaaagaaaagccccagggcaggca 266

                                                                       
Query: 181 agctgtaaatcataaaacttcccctgaagagggaaaatgctctatatgtttgtgataaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agctgtaaatcataaaacttcccctgaagagggaaaatgctctatatgtttgtgataaac 206

                
Query: 241 tggtg 245
           |||||
Sbjct: 205 tggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space:   150096
Effective search space used:   150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)