Query= MSMg01no397_c13.b1 MSMg01no397_c13.b1 CHROMAT_FILE:
MSMg01no397_c13.b1 PHD_FILE: MSMg01no397_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:29 2005
(457 letters)
>mm_chr13_114657691_114658547
Length = 857
Score = 799 bits (413), Expect = 0.0
Identities = 446/457 (97%), Gaps = 2/457 (0%)
Strand = Plus / Plus
Query: 1 cagaaccctgactaatataatagtcagcttgtaagaatttaagaaggaaggacttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 201 cagaaccctgactaatataatagtcagcttgtaagaatttaagaaggcagggcttgtttt 260
Query: 61 gtgatccaatgttccttttggcatttaattattagtaactctgagtaagactctcacatt 120
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 gagacccaatgttccttttggcatttaattattagtaactgtgagtaagactctcacatt 320
Query: 121 ttcttagttctttagtcataccaccaaataaaagtcacttctgctccc-gtattcaggtt 179
||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct: 321 ttcttagttctttagtcatactaccaaataaaagtcacttctgc-ccctgtattcaggtt 379
Query: 180 atatttgcgctttcctttgtaaggtgctaactgctagcaatcaaagatacttcttgtgtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atatttgcgctttcctttgtaaggtgctaactgctagcaatcaaagatacttcttgtgtt 439
Query: 240 ctctgagtttgttaaggtctactagaggacacccctcacttctttggggtgtgggggata 299
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 ctctgagtttgttaaggtccactagagggcacccctcacttctttggggtgtgggggata 499
Query: 300 taaaacaagtttaagtgtgtaattttattttgctttttgggagctagccctgttaactct 359
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaaacaagtttaagtgtataattttattttgctttttgggagctagccctgttaactct 559
Query: 360 cagagtaaatccatctcatttcttaaactgggacctgaggaggctgtcgttgatggcttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagagtaaatccatctcatttcttaaactgggacctgaggaggctgtcgttgatggcttt 619
Query: 420 tagatctgtagccttgatggtgaatgttgtgatgtgg 456
|||||||||||||||||||||||||||||||||||||
Sbjct: 620 tagatctgtagccttgatggtgaatgttgtgatgtgg 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_c13.g1 MSMg01no397_c13.g1 CHROMAT_FILE:
MSMg01no397_c13.g1 PHD_FILE: MSMg01no397_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:29 2005
(424 letters)
>mm_chr13_114767729_114768552
Length = 824
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Minus
Query: 86 aaacatgaggctggagagatggctcagtggataagaaagggcatttgctgctctatctac 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aaacatgaggctggagagatggctcagtggataagaaagggcatttgctgctctatctac 765
Query: 146 cataaggcatgaatttagttccagcacccacttggtggtggtgaatccagcgccttctgc 205
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 764 cataaggcatgaatttagttccagcacccacttggtggtggggaatccagcgccttctgc 705
Query: 206 tggccgatgtgggcagcaggcaaatgcacagtgcatataatacatgcaggaaaccactcc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tggccgatgtgggcagcaggcaaatgcacagtgcatataatacatgcaggaaaccactcc 645
Query: 266 tacacacgaagtaaaaataataaatcgtaaaaaaacacaaccgaacaaaaacattatctc 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tacacacgaagtaaaaataataaatcgtaaaaaaacacaaccgaacaaaaacattatctc 585
Query: 326 aataataagccattgctcaggcaaccctgacacctcacgcttcaccagaaagcctgtttt 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aataataagccattgctcaggcaaccctgacacctcacgcttcaccagaaagcctgtttt 525
Query: 386 ctcccctttaattaaaaaactggccttaattgatgtaaa 424
|||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctcccctttaattaaaaaactggccttaattgatgtaaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
