Query= MSMg01no397_p14.b1 MSMg01no397_p14.b1 CHROMAT_FILE:
MSMg01no397_p14.b1 PHD_FILE: MSMg01no397_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:34 2005
(471 letters)
>mm_chr13_96863404_96864273
Length = 870
Score = 721 bits (373), Expect = 0.0
Identities = 441/465 (94%), Gaps = 7/465 (1%)
Strand = Plus / Minus
Query: 7 aaaacaaaacaaaacaaaacaaaacaaaaaaccccgcctaattgcccaatggcaggagtc 66
||||| |||| |||||||| ||| ||||||| ||||||||||||||||||||||||||
Sbjct: 698 aaaac-aaac-aaacaaaa-aaatcaaaaaa---cgcctaattgcccaatggcaggagtc 645
Query: 67 aggtcagataaattaaagctcaatgtaaattaaagtggcagaataatattgaaaagatag 126
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 644 aggtcagataaattaaagcccaaagtaaattaaagtggcagaataatattgaaaagctag 585
Query: 127 agaagttacaatatcaaagcaaattatgaaagcatccacctggactgaatgtatttccag 186
| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 584 aaaagttgcaatatcaaagcaaa-tatgaaagcatccacctggactgaatgcatttccag 526
Query: 187 tctgctctccccagctctataccctagtccatgccctgggttatatttcaaaatactgat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tctgctctccccagctctataccctagtccatgccctgggttatatttcaaaatactgat 466
Query: 247 ctatatgactgatccctgaaggacaaagaaatcctcagggaatgtaacaaaaaggaggac 306
| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 465 caaaatgactgatccctgaaggacaaagaaatcctcagggaatgtaacgaaaaggaggac 406
Query: 307 atacaagcttggggactgagactgttgcaagattgccaccagtgtgtggttaacaggcag 366
|| |||||||||||||||||||||||| ||||||| ||||| |||||||||||| ||||
Sbjct: 405 atgcaagcttggggactgagactgttgtaagattgtaaccagggtgtggttaacaagcag 346
Query: 367 actgggagacgggaaaacaccgtccacctctacctggtagaaggacagccgatagctctc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actgggagacgggaaaacaccgtccacctctacctggtagaaggacagccgatagctctc 286
Query: 427 taccagttatccaagatgaaaaccccaagtcttacagctttgtga 471
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caccagttatccaagatgaaaaccccaagtcttacagctttgtga 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 870
Length adjustment: 10
Effective length of query: 461
Effective length of database: 860
Effective search space: 396460
Effective search space used: 396460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_p14.g1 MSMg01no397_p14.g1 CHROMAT_FILE:
MSMg01no397_p14.g1 PHD_FILE: MSMg01no397_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:35 2005
(165 letters)
>mm_chr13_96675096_96675660
Length = 565
Score = 315 bits (163), Expect = 7e-91
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 1 actgggccatatcctgcttctgttagtggcttctaaattattaaaaaggacattgtcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgggccatatcctgcttctgttagtggcttctaaattattaaaaaggacattgtcaaa 260
Query: 61 atgattgctttcttgggagaggagaatccaaggatggagtaaagagagctatctatcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgattgctttcttgggagaggagaatccaaggatggagtaaagagagctatctatcttt 320
Query: 121 ttttttttttttggtaaggaactaggagagaagagtgtgtatg 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttttttttggtaaggaactaggagagaagagtgtgtatg 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
