Query= MSMg01no399_j12.b1 MSMg01no399_j12.b1 CHROMAT_FILE:
MSMg01no399_j12.b1 PHD_FILE: MSMg01no399_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:39 2005
(292 letters)
>mm_chr13_103844413_103845104
Length = 692
Score = 518 bits (268), Expect = e-151
Identities = 286/292 (97%)
Strand = Plus / Minus
Query: 1 tagcattttgagagataccatgtcttacatgcatcgtgttatatatgttggtatcatgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 492 tagcattttgagagataccatgtcttacatgcatcgtgttatatatgttggtatcaggaa 433
Query: 61 ctggcttggcaggtcacttcagaacccagtgatgtcacctataggtgacaaggacccatg 120
|||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 432 ctggcttgccaggtcacctcagaacccagtgatgttacctataggtgacaaggacccatg 373
Query: 121 catctgttgccatagcaatcacatacattcctagagtctacttcccacctctacctgcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 catctgttgccatagcaatcacatacattcctagagtctacttcccacctctacctgcga 313
Query: 181 gctgttatgtcacagcctaaataaaaggcaaacccttcctgaccctcactcctttccttt 240
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 312 gctgttatgtcacagcctaaataaaaggcaaacccctcctgacccttactcctttccttt 253
Query: 241 tctctcttttcccctttgtctctgtcaccccctctttgtccctgcccctaca 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tctctcttttcccctttgtctctgtcaccccctctttgtccctgcccctaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no399_j12.g1 MSMg01no399_j12.g1 CHROMAT_FILE:
MSMg01no399_j12.g1 PHD_FILE: MSMg01no399_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:39 2005
(327 letters)
>mm_chr13_103686339_103687064
Length = 726
Score = 536 bits (277), Expect = e-157
Identities = 322/355 (90%), Gaps = 29/355 (8%)
Strand = Plus / Plus
Query: 1 tttctccaggtccaagatcaacaagtccttaaactcagacttgggaaagaacattacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctccaggtccaagatcaacaagtccttaaactcagacttgggaaagaacattacata 260
Query: 61 atagccacttaatggctattgttttacagtacaaagggttcatttggcatttcctagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagccacttaatggctattgttttacagtacaaagggttcatttggcatttcctagaga 320
Query: 121 gctttattcagttggtagcttttcccatgacagacatgctctcttaatcccagccctcca 180
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 gctttattcaggtggtagcttttcccatgacagacatactctcttaatcccagccctcca 380
Query: 181 tgaatctataaaagaaaacatttaataactgtaatttccaaggtagagacatctagcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaatctataaaagaaaacatttaataactgtaatttccaaggtagagacatctagcatg 440
Query: 241 ctgcgttccacaagacacacatgttgtatgtgaatggggaatatac--------ttttgt 292
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ctgcattccacaagacacacatgttgtatgtgaatggggaatatacgttgttttttttgt 500
Query: 293 ttt---------------------aggtaagctacaggtgctgtgacttctttca 326
||| |||||||||||||||||||||||||| ||||
Sbjct: 501 ttttttgttttttgttgtttttttaggtaagctacaggtgctgtgacttccttca 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 726
Length adjustment: 9
Effective length of query: 318
Effective length of database: 717
Effective search space: 228006
Effective search space used: 228006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
