NCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAGCTATTTACTCAATTAAAATTAATACTATTGACCATATTAAA
TCAAAGAAGGATTTAACCAGTATCTTAATGAAGAGGATGGGTCTTCAGAA
GAAAAGACTATCATATGTTCAGCATAAATGGTAATAAATCCTTAATGTTT
CTTCAAGGAAGAAGATGACTCTTCAAATGTCTACTCATTCTCTGACAAAA
AAACTGGACATATTAGGTATAACTGAGAAGATTATTGGTGGCCCTAGCGA
GTACCTGAAACACGCTCAGGAACTGTAGGCACATATTGGTCTGATTCTCT
ATCTACTTAAACAATGAAATACAGAAGTAAGCAAATCCCATCCCCAGGAA
TATATTAAAATTAATACATGTGGGCTGTAGAGATTGTCCAGTGGTTAAGA
GTATATAAAAAGGAAAACAAAATAAAATTCAAAAAAATCAGTAAGAAAGA
ATAAAAATACCAAAATGGAATGAAGCCACTACACCCCACCCCACTATACC
AACCCCACCCCACACACCATGCTACTCTTCCACCCCAACTCACTCCTCCA
CCCTACTCCCACATCCTGATCCTCCACCCCACCCCATACACAAATGTGGA
GTCTCTTTATGTGAGCCAACTATTCCTAGCTGTAGTACCTTCCTTGGGAT
CTGCTTGTAAGTGATTGCTTCTTTCCAGCAAGTATGACTTGCCAAAGATT
TTTAGT

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAACAAAACCACCCAGGATCTAAAAA
TGGAAATAGAAGCCATAAGGAAATCCCAAAGGGAGACAACCATGGAGATA
GAACACCTAGGAAAGAGGTCAGGAGTCATAGATGCAAGCATCACAAATAG
AATGAATACAAGAGATAGCTTCTCCATTGGGGCCCTGTGTTCCAAATCAT
AGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCT
CATACGAGACAGCTATAACCTTTTATTCTCTTCAGCAAAATCTTTCTGGC
ATATGCAATAGTGTCCAGGTTTGGTGACTGATTATGGGATTATGGATCCC
TGGGTGGGGTGGAAGCACCCAAGGAGCTGAAGGGGTCTGCAACACTATAG
GTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTGTATCTCTAG
CTGCATATGTAGCAGAAGATGGCCTAGTCGGCCATCACTGGGAAGAGAGG
CCCCTTGCTATTGCAAACTTTATATGCCCCAGTACAGGGGAATTCCAGGG
CCAAGAAGCANGAGTGGGTGGTTAGGGGAGCAGGGCAGAGGGATGTTATA
GGGAAACTTTTGTGATATCTTATTGAATGGATATAAAGAAACTATCCTAA
AAAATTTGTCAGGGGGAAAAAAACGATTTTTAAGATTGAAGAGAGAACCC
CCGGTGCGAACCCTGC

Query= MSMg01no401_g12.b1 MSMg01no401_g12.b1 CHROMAT_FILE:
MSMg01no401_g12.b1 PHD_FILE: MSMg01no401_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:01 2005
         (569 letters)



>mm_chr13_4881377_4882344
          Length = 968

 Score =  915 bits (473), Expect = 0.0
 Identities = 524/541 (96%), Gaps = 2/541 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taaaattaatactattgaccatattaaatcaaagaaggatttaaccagtatcttaatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 652 taaaattaatactattgaccatattaaatcaaagaaggatttaaccattatcttaatgaa 593

                                                                       
Query: 61  gaggatgggtcttcagaagaaaagactatcatatgttcagcataaatggtaataaatcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaggatgggtcttcagaagaaaagactatcatatgttcagcataaatggtaataaatcct 533

                                                                       
Query: 121 taatgtttcttcaaggaagaagatgactcttcaaatgtctactcattctctgacaaaaaa 180
           |||| |||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||
Sbjct: 532 taatatttcttcaaggaagcagatggctcttcaaatgtgtactcattctctga-gaaaaa 474

                                                                       
Query: 181 actggacatattaggtataactgagaagattattggtggccctagcgagtacctgaaaca 240
           |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 473 actggacataatagatataactgaaaagattattggtggccctagcgagtacctgaaaca 414

                                                                       
Query: 241 cgctcaggaactgtaggcacatattggtctgattctctatctacttaaacaatgaaatac 300
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgttcaggaactgtaggcacatattggtctgattctctatctacttaaacaatgaaatac 354

                                                                       
Query: 301 agaagtaagcaaatcccatccccaggaatatattaaaattaatacatgtgggctgtagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agaagtaagcaaatcccatccccaggaatatattaaaattaatacatgtgggctgtagag 294

                                                                       
Query: 361 attgtccagtggttaagagtatataaaaaggaaaacaaaataaaattcaaaaaaatcagt 420
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 293 atggtccagtggttaagagtatataaaaaggaaaacaaaataaaattaaaaaaaatcagt 234

                                                                       
Query: 421 aagaaagaataaaaataccaaaatggaatgaagccactacaccccaccccactataccaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aagaaagaataaaaataccaaaatggaatgaagccactacaccccaccccactataccaa 174

                                                                       
Query: 481 ccccaccccacacaccatgctactcttccaccccaactcactcctccaccctactcccac 540
           ||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 173 ccccaccccacacaccatgctactctttcaccccaactcactcctccaccccac-cccac 115

            
Query: 541 a 541
           |
Sbjct: 114 a 114


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space:   535522
Effective search space used:   535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)