TATAAATCGCGCCCCACACGACGCCAAATTCCAAAAGCGCGGAANNCCNT
ATTACANCACCAGGGGNGAGNNGAAAGAAAGAAGGAGCCGGAANAGGAAA
GAAGGCCGAGACACGAAGCACAGAAAACGAGGCGAGAAAACACTTCACCG
ACCCAAGAAAACCCGAGAGCCGGCCCCCCACCACCCCAGAAGCAACCCAA
GCCCGCCACCCACAAACACACTCCCCACCCTCATTTACTTTTATCATTCA
GAGGATGTTTCAAAGCTCTAGCAAAATTTGCAAGTATGATATACAACACT
TTTTTTTTTTACCACACGCACAACGACTATCAAGAACGGACTCTTTCCTG
CCCCCCACCATTGCCTGAGTAGAGATTTGTTCTGTATCGTGTCCCCGGTT
CCCTTCAATATCTATCTGTGCATTGTTTCCCTACCTAAAACATCCATTCA
TCTTTTCACCTCAAACCACGCTCTCCCCACTTCCTGCTATCCTTCTTGTT
ACTTATCCCTGCAACTCCATATTTTCCCTGATCATTTTACCCCACCCTTA
TCATGTATCACGTCCTCCACATCTTCTTCATTCTCCCCGTCGTCCTTTCT
CATATACAAAATAATCACGCGATTCGCCTATTACCGATCTTGTTTCTTCT
CTTTTTTTCGCTTCCTACCTTCCTCATTTGTCTCCTCTCTTATCAGCTTT
TCTGCTTTTTCCCGCTCCCCGCTTCTTTTTCTCTCCCCCTCCTCTACCCC
TCCCCCTTTTTACC

TTCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATCTTCAATTGCAGGTTTGG
TGTACTAGCCTTCGCCCAGAACTTGTGAGAGCTTCCTTGGAACGGTCACT
GCAAAAACTTCAGTTCGATTATGTGGACCTGTATCTCATTCATTACCCAA
TGGCCCTGAAAGTATGTTGCCTGAAATTTCAGAAATATTTCATATAGAGT
ATAGTTTGGAATTATGGTGTCTATGATATGGCAGCTATAGCTTCTATGAA
TCTAAACTGCACATCCTGCTGATTTTCTTAGATCTTAACAAAGGAGGGGA
AAGAATGATTTTATGGTCCAGGAGAGTAGAAAGTTTGTTGTGAGATTACA
TCTTCTAGAGATATCAGAGAAGCTATACTCACGAAATTTCACCAATGTGC
TGACCAGAGTCAAGCTGAACAAGAACCAGTAGACATGTTAATGTGGAAGG
GGAAGGTCTCATGAGGCCAAATATTAGACAAAAAATAAGCATACAAAAAA
AACCTCAAAAAATATCTATAGACAACTAAGGAATGCTGAAAGCAAGTTAG
ATAATCTTCTCAGGAAAGAGACCTCAGATTTTTTATCAACCAAGTGGTCA
ACTATTAATAATCGTAAAAGTCAACAAATTCATTTCCTAATGACCCAGAG
ATACATTATTTATAGCAACCTCGTACTATATATAACAAAATATAATCCTT
AC

Query= MSMg01no401_m01.g1 MSMg01no401_m01.g1 CHROMAT_FILE:
MSMg01no401_m01.g1 PHD_FILE: MSMg01no401_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:27 2005
         (532 letters)



>mm_chr13_4575262_4576193
          Length = 932

 Score =  911 bits (471), Expect = 0.0
 Identities = 518/537 (96%), Gaps = 7/537 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   catcttcaattgcaggtttggtgtactagccttcgcccagaacttgtgagagcttccttg 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 catcttcaattgcaggtttggtgtactagccttcacccagaacttgtgagagcttccttg 260

                                                                       
Query: 61  gaacggtcactgcaaaaacttcagttcgattatgtggacctgtatctcattcattaccca 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 gaacggtcactgcaaaaacttcagttcgactatgtggacctgtatctcattcattaccca 320

                                                                       
Query: 121 atggccctgaaagtatgttgcctgaaatttcagaaatatttcatatagagtatagtttgg 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 atggccctgaaagtatgttgcctgaaattccagaaatatttcatatagagtatagtttgg 380

                                                                       
Query: 181 aattatggtgtctatgatatggcagctatagcttctatgaatctaaactgcacatcctgc 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattatagtgtctatgatatggcagctatagcttctatgaatctaaactgcacatcctgc 440

                                                                       
Query: 241 tgattttcttagatcttaacaaaggaggggaaagaatgattttatggtccaggagagtag 300
           |||   ||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaggctc--agatcttaacaaaggaggggaaagaatgattttatggtccaggagagtag 498

                                                                       
Query: 301 aaagtttgttgtgagattacatcttctagagatatcagagaagctatactcacgaaattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 499 aaagtttgttgtgagattacatcttctagagatatcagagaagctatacccacaaaattt 558

                                                                       
Query: 361 caccaatgtgctgaccagagtcaagctgaacaagaaccagtagacatgttaatgtggaag 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 559 caccaatgtgctgaccagagtcaagctgaacaaggaccagtagacatgttaatgtggaag 618

                                                                       
Query: 421 gggaaggtctcatgaggccaaatattagacaaaaaataagcatacaaaaaaaa-----cc 475
           ||||||||||||||||||||||||||||||||| || ||||||||||||||||     ||
Sbjct: 619 gggaaggtctcatgaggccaaatattagacaaataacaagcatacaaaaaaaaaaaaacc 678

                                                                    
Query: 476 tcaaaaaatatctatagacaactaaggaatgctgaaagcaagttagataatcttctc 532
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcaaaaaatatctatagacaactaaggaatgctgaaagcaagttagataatcttctc 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space:   481284
Effective search space used:   481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)