Query= MSMg01no402_f09.b1 MSMg01no402_f09.b1 CHROMAT_FILE:
MSMg01no402_f09.b1 PHD_FILE: MSMg01no402_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:11 2005
(227 letters)
>mm_chr2_11656304_11656931
Length = 628
Score = 397 bits (205), Expect = e-115
Identities = 222/229 (96%), Gaps = 5/229 (2%)
Strand = Plus / Plus
Query: 1 ttgtttttttgttttttg-ttttttg-ttttttttatctaacagccagaatctgcctata 58
|||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203 ttgttttt---ttttttgtttttttgtttttttttatctaacagccagaatctgcctata 259
Query: 59 gcctaggttgaattcatttctgaatatcatactgccttctggagtttggagaattggact 118
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcccaggttgaattcatttctgaatatcatactgccttctggagtttggagaattggact 319
Query: 119 ttcttttgaacatgacactggaacctgcacattgttggagtacctcattgtcctctaata 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttcttttgaacatgacactggaacctgcacattgttggagtacctcattgtcctctaata 379
Query: 179 taaaagccagctgctccctagtctatggcacatagagtaggtctatcag 227
||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 taaaagccagctgctccctggtctatggcacatagagtaggtctatcag 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 628
Length adjustment: 9
Effective length of query: 218
Effective length of database: 619
Effective search space: 134942
Effective search space used: 134942
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_f09.g1 MSMg01no402_f09.g1 CHROMAT_FILE:
MSMg01no402_f09.g1 PHD_FILE: MSMg01no402_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:11 2005
(237 letters)
>mm_chr13_21963062_21963702
Length = 641
Score = 257 bits (133), Expect = 3e-73
Identities = 213/243 (87%), Gaps = 10/243 (4%)
Strand = Plus / Minus
Query: 1 gggctataaaaacatgaaatttacaaactgcattc-gtcttttcta--ta----tatgtc 53
||||||||||||||||||||||||||||||||||| | | |||||| || ||||||
Sbjct: 440 gggctataaaaacatgaaatttacaaactgcattcag-catttctatgtatgtctatgtc 382
Query: 54 ctaccaattccagtccacataaattagaaaacacttaaacttctcatgtgtcttcagtga 113
||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||| |||
Sbjct: 381 ctaccaattcctgtccacataaattagcaaacactaaaacttcccatgtgtcttcaatga 322
Query: 114 agtggaaatagttggaggagaaccagagtccttcttcttttttttagcctatgtttctcc 173
|||| ||||||||||||| ||||||||||||| || | ||||||||||||||||||||
Sbjct: 321 agtgaaaatagttggaggtgaaccagagtcctgctgc--atttttagcctatgtttctcc 264
Query: 174 agtggttttcacactaaaatgctcaatctacacaacctattaatgcacacgttattgaaa 233
| ||||||||||| | ||||||| | ||| |||||||||||| |||||| |||||||||
Sbjct: 263 aatggttttcacatttaaatgcttagcctatacaacctattaaggcacacattattgaaa 204
Query: 234 taa 236
|||
Sbjct: 203 taa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 641
Length adjustment: 9
Effective length of query: 228
Effective length of database: 632
Effective search space: 144096
Effective search space used: 144096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
