Query= MSMg01no402_p15.b1 MSMg01no402_p15.b1 CHROMAT_FILE:
MSMg01no402_p15.b1 PHD_FILE: MSMg01no402_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:05 2005
(459 letters)
>mm_chr13_77470241_77471099
Length = 859
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 8 gaattctatcattctaccaaatgattgttattaataaagccatttaataaataaaaaagg 67
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattctatcaacctaacaaatgattgttattaataaagccatttaataaataaaaaagg 562
Query: 68 tttgcctgacttttaatataccacagtatattctttctcaccaacttcacagctagcaca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgcctgacttttaatataccacagtatattctttctcaccaacttcacagctagcaca 502
Query: 128 cattttggaatgttagagctacaaaggatgggaggactcatcgacaaggcttgcaagctt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattttggaatgttagagctacaaaggatgggaggactcatcgacaaggcttgcaagctt 442
Query: 188 gtgtgctgcacaggggacagcagcacctcaccagggagcttggtagggcctcagccattg 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtgctgcacaggggacagcagcacctcaccagggagcttggtagggcctcagccattg 382
Query: 248 cccaatcatcattaactggagttctggttatgagaaagcagttgaaagtttgaaatattc 307
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 cccaatcatcattaactggagttctggggatgagaaagcagttgaaagtttgaaatattc 322
Query: 308 tggcccaacaccacactcaatgtttgcctctgaaatgccagaggataggcctgagggctc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcccaacaccacactcaatgtttgcctctgaaatgccagaggataggcctgagggctc 262
Query: 368 attgggtaagcagtagacatgtgacaagaaaccatagatctagtcatggctcactgtgtg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgggtaagcagtagacatgtgacaagaaaccatagatctagtcatggctcactgtgtg 202
Query: 428 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 459
||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_p15.g1 MSMg01no402_p15.g1 CHROMAT_FILE:
MSMg01no402_p15.g1 PHD_FILE: MSMg01no402_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:05 2005
(630 letters)
>mm_chr13_77285438_77286467
Length = 1030
Score = 1176 bits (608), Expect = 0.0
Identities = 621/630 (98%), Gaps = 8/630 (1%)
Strand = Plus / Plus
Query: 1 tttctcttgccttattaattcagttcaagagtaaatagtgaaaaggaatggggatagcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tttctcttgccttattaattcagttcaagagtaaatagtgaaaaggaatggggatagcgg 268
Query: 61 gcatcctttttttacatttaagaccatctgaaagactatcagggttctctcagtagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gcatcctttttttacatttaagaccatctgaaagactatcagggttctctcagtagaaca 328
Query: 121 catgtaggaatcttatttttactttgtttatagtctgtctttatttatttatttatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 catgtaggaatcttatttttactttgtttatagtctgtctttatttatttatttatttat 388
Query: 181 ttatttatttatttatttatttatttatttctcttgttcatctgtttgtttttagtattt 240
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389 ttatttatttatttatttattt--------ctcttgttcatctgtttgtttttagtattt 440
Query: 241 ttattctaaccaatagcctagaacttaaatgaaaattaaagaatcctcagttttgtctta 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttattcaaaccaatagcctagaacttaaatgaaaattaaagaatcctcagttttgtctta 500
Query: 301 aaacagttatataggctagtagttgagaactgaatcagggataaaactcagcctcacagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacagttatataggctagtagttgagaactgaatcagggataaaactcagcctcacagt 560
Query: 361 gctggggtcacagagacttgtcattatcaatgtcctctgaagtatgcaccgtcacggtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctggggtcacagagacttgtcattatcaatgtcctctgaagtatgcaccgtcacggtaa 620
Query: 421 tcatttctagaattcctgtgaaccttttatttatttatcagtagtaatttttaaaattat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatttctagaattcctgtgaaccttttatttatttatcagtagtaatttttaaaattat 680
Query: 481 ttttcttgttttcctaatttagtaacttgaatcttctctctctctttttccctatctttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttcttgttttcctaatttagtaacttgaatcttctctctctctttttccctatctttc 740
Query: 541 tctttctaaaggtcttttgatttcatttccttttaaagtatgtaagttcaggctggtgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctttctaaaggtcttttgatttcatttccttttaaagtatgtaagttcaggctggtgac 800
Query: 601 agttcagtggcaaagcacctcactaagatt 630
||||||||||||||||||||||||||||||
Sbjct: 801 agttcagtggcaaagcacctcactaagatt 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
