Query= MSMg01no404_e01.b1 MSMg01no404_e01.b1 CHROMAT_FILE:
MSMg01no404_e01.b1 PHD_FILE: MSMg01no404_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:51 2005
(538 letters)
>mm_chr13_98312738_98313675
Length = 938
Score = 625 bits (323), Expect = 0.0
Identities = 347/357 (97%), Gaps = 6/357 (1%)
Strand = Plus / Minus
Query: 134 agagagagaaagaaagacagagagagaggaagaaagacagggggagagagagagacatgc 193
||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 938 agagagagagagaaagacagagagagag--agaaagacagggagagagagagagacatgc 881
Query: 194 act--cacacacatatacacacatatatacacacacttatacacatatatacatacacac 251
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 880 actcacacacacatatacacacatatatacacacacttatgcacatatatacatacacac 821
Query: 252 acagacatacacacttatatacatacacacatatacacacatatgtatatacatacat-- 309
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 820 acagacatacacacttatatacatacatacatatacacacatatgtatatacatacatac 761
Query: 310 acacacttcaatttaaacaaaagtttatgtatgtatgtatgtacatgtgtatgtaagtag 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 acacacttcaatttaaacaaaagtttatgtatgtatgtatgtacatgtgtatgtaagtag 701
Query: 370 tatgtatgtatgtacatacaaatatgtatgtcttgtgtcttggctgtgtggacaccagag 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tatgtatgtatgtacatacaaatatgtatgtcttgtgtcttggctgtgtggacaccagag 641
Query: 430 ccatcacagacagcagcccttcccacaggactgtggtctatcgagcatagggttgac 486
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ccatcacagacagcagcccttcccacaggactgtggtctatcgagcatagggttgac 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_e01.g1 MSMg01no404_e01.g1 CHROMAT_FILE:
MSMg01no404_e01.g1 PHD_FILE: MSMg01no404_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:51 2005
(477 letters)
>mm_chr13_98152708_98153584
Length = 877
Score = 907 bits (469), Expect = 0.0
Identities = 475/477 (99%)
Strand = Plus / Plus
Query: 1 agatgagctgggcttgcctttaatcccagcaatcagaaagcagaggtaggcagagttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgagctgggcttgcctttaatcccagcaatcagaaagcagaggtaggcagagttctg 260
Query: 61 agttggaggccagcttggtctacagggtgagctctgtgacagctaggactacagctggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttggaggccagcttggtctacagggtgagctctgtgacagctaggactacagctggtg 320
Query: 121 ggaactggtaccagggtgatcttaacttggaatgatcttcatctctctgccacttgagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaactggtaccagggtgatcttaacttggaatgatcttcatctctctgccacttgagat 380
Query: 181 ctggggttacagatacaaagcattaggccttgtgctaccagaagttttaactggtacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggggttacagatacaaagcattaggccttgtgctaccagaagttttaactggtacaac 440
Query: 241 ttatcagcaatggctactttgatagtagttctgtgaagccttctgcatgccggaaggata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatcagcaatggctactttgatagtagttctgtgaagccttctgcatgccggaaggata 500
Query: 301 gcgtggagcattaacaagattcccattgagagtactggtcagagatgggggaagagaaac 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatggagcattaacaagattcccattgagagtactggtcagagatgggggaagagaaac 560
Query: 361 tacaaggttccgcagaggacagaagggtaggagaatctggaggctgcctgggtgaactga 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacaaggttctgcagaggacagaagggtaggagaatctggaggctgcctgggtgaactga 620
Query: 421 ctgaaggatggctttcatatctctctgtttctcagctgtgcggttgctgggaagggc 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgaaggatggctttcatatctctctgtttctcagctgtgcggttgctgggaagggc 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
