XXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCCTAG
GAGTTTCCCCAGGTCATTTAAATGGCAGAGACAGTAATATGGGAGATAAA
TGTTAGGAGTATACAGACTTTGCAAGCATTAAGCCAATGTCTAACAGACT
CTCACTGAGGTACAGAAATCATTTTTGTTATTTCATTTACCGGAGTAAAC
ATGTACCACAAAGTCTTACAAATGTCTTCATCATAAAGGCCTGACCTATT
TCTTGCCTCAGACCACCTCATTATTAAATCTCATATCTTGAATTGTTTAA
AATTACTAATATCATTAGTCAATGTGAAGATTAGATATTAAATTAATCCC
CCTCTATTTAATGTTTGTGAGTTACTACAATGCATGTTCTCTTATTAGAA
AATACAGATTCATAAACTGAATTATGCAAAAACTAGCTCATCAGATATCT
TGAAAGAGAACCAAGCCTTTCCTCTGCCCTGCCCTGCATGGATTTATACA
ACAATAATAAATTGAAATAAGGTATTAAAAAACATTATTTCTTGGAACTA
TCTGATATTCCATGAGAATGCCCCANTTTCTGATCCTGGGATCTAGTAGC
TTATTTTCACCTATGATCCTATATATTTGAAGATGGACCTGAGGATTAAA
AAACTATACTGAACATTCCCAAAAAAAAATTTTCAAAATGAAAAGCAGGT
CGCGCCTTTCAAAGGGGGGAAAACAAAGTTTTTTCTTTTTTTCCACAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTCTTGACTCCCTGATTCACAAAGAGCTAACAAGTTC
TGAGCCTCTAGCCTATCCAGCAAAGAGCTCCTGGCTGGCTTGCCAGAGAA
AGAAGTTCTAGCAATAAATTCTTTACCTAATTTTCTACCGATAAATGGCA
GTCATTATCTACAAAACCTTTGATTTTCAGTCGCAGAATAAGCAAGAGAG
TGTTAAGTTTCTAGAAACCATCAGCTTCTATACTTCATTAGTTAGTGAGA
GAGTTACAAAGCCTGAGATCATCAGTCTTTTGGCCTTCATCCAACTCTGT
TCCAACTCAACTCATTCACCTAAGGCTGGGCAGGCCCCCAGCCATGTTCT
GTTGATCCTGGGAATTGGACCCCAACCATATGGAAATACAGACAAAGTAC
ATAACTACTAAATACCTTCCTAGATTCTCTTTGTAATTTTTTTTTTACTT
TTCTAATTATTTTGTTTATTTTTTATTTTGGGGCATACTCCACAGGTGTA
GGTAAGATGAGAGGTTGTTGGAATCAGTTATGTCGATGAACAATGTGTGT
CCTGGTGATCAGTTCTGATCTTTAGTGGGGNTGACAAGGGCATCATTTCA
CTTATCTCATTTCTAGAACTTCTGGACTCTCCCCTTTGGCCTTTATTAAA
AAACAATGGCAGGGGTTTTTGTTAAAAGCGCCCCCTCGCGGCAAAATGGA
AGACA

Query= MSMg01no404_f21.b1 MSMg01no404_f21.b1 CHROMAT_FILE:
MSMg01no404_f21.b1 PHD_FILE: MSMg01no404_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:01 2005
         (485 letters)



>mm_chr13_27896975_27897859
          Length = 885

 Score =  886 bits (458), Expect = 0.0
 Identities = 475/482 (98%), Gaps = 4/482 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcctaggagtttcc--ccaggtcatttaaatggcagagacagtaatatgggagata 63
           |||||||||||||   ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaattcctaggag--gcccaccaggtcatttaaatggcagagacagtaatatgggagata 628

                                                                       
Query: 64  aatgttaggagtatacagactttgcaagcattaagccaatgtctaacagactctcactga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aatgttaggagtatacagactttgcaagcattaagccaatgtctaacagactctcactga 568

                                                                       
Query: 124 ggtacagaaatcatttttgttatttcatttaccggagtaaacatgtaccacaaagtctta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggtacagaaatcatttttgttatttcatttaccggagtaaacatgtaccacaaagtctta 508

                                                                       
Query: 184 caaatgtcttcatcataaaggcctgacctatttcttgcctcagaccacctcattattaaa 243
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caaatgtcttcatcatgaaggcctgacctatttcttgcctcagaccacctcattattaaa 448

                                                                       
Query: 244 tctcatatcttgaattgtttaaaattactaatatcattagtcaatgtgaagattagatat 303
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 447 tctcatatcttgaattgtttaaaattaccaatatcattagtcaatgtgaagattagatat 388

                                                                       
Query: 304 taaattaatccccctctatttaatgtttgtgagttactacaatgcatgttctcttattag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 taaattaatccccctctatttaatgtttgtgagttactacaatgcatgttctcttattag 328

                                                                       
Query: 364 aaaatacagattcataaactgaattatgcaaaaactagctcatcagatatcttgaaagag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaaatacagattcataaactgaattatgcaaaaactagctcatcagatatcttgaaagag 268

                                                                       
Query: 424 aaccaagcctttcctctgccctgccctgcatggatttatacaacaataataaattgaaat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaccaagcctttcctctgccctgccctgcatggatttatacaacaataataaattgaaat 208

             
Query: 484 aa 485
           ||
Sbjct: 207 aa 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)