Query= MSMg01no404_g21.b1 MSMg01no404_g21.b1 CHROMAT_FILE:
MSMg01no404_g21.b1 PHD_FILE: MSMg01no404_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:06 2005
(433 letters)
>mm_chr13_84493066_84493898
Length = 833
Score = 791 bits (409), Expect = 0.0
Identities = 425/433 (98%), Gaps = 6/433 (1%)
Strand = Plus / Plus
Query: 1 ccagaatctgcaggaataccatgagtagttctttggcaagtttctctctacaaaagtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccagaatctgcaggaataccatgagtagttctttggcaagtttctctctacaaaagtgaa 266
Query: 61 ggccaacgaagaccagtgaagaccaaggaaacattgcaagaacatctcactgtttgtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggccaacgaagaccagtgaagaccaaggaaacattgcaagaacatctcactgtttgtggg 326
Query: 121 gttccatttgtattatcttttaacatcatattccttctcaagtgtctggtttcagcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gttccatttgtattatcttttaacatcatattccttctcaagtgtctggtttcagcaaaa 386
Query: 181 catttcctgtcctctcaaaagacagcttccaaaaaacaaaaaaaaacaaaacaaaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 387 catttcctgtcctctcaaaagacagcttccaaaaaacaaaaaaaaacaa--caaaa---- 440
Query: 241 aaaaaacatcagttgacacaactgagtcattaaataaaccagaaatttccacttcaggag 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaacatcagctgacacaactgagtcattaaataaaccagaaatttccacttcaggag 500
Query: 301 actgtttaaaccaaacagggagaaagatggattactcttgtggagaaaagcaagaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgtttaaaccaaacagggagaaagatggattactcttgtggagaaaagcaagaagaca 560
Query: 361 aagtcagcaatgcttcctagagctctttctagtgccagacattatccatgggtcaaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 aagtcagcaatgcttcctagagctctttctagtgccagacattatccatggatcaaccca 620
Query: 421 ttatttccttaca 433
|||||||||||||
Sbjct: 621 ttatttccttaca 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_g21.g1 MSMg01no404_g21.g1 CHROMAT_FILE:
MSMg01no404_g21.g1 PHD_FILE: MSMg01no404_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:06 2005
(379 letters)
>mm_chr13_84631318_84632096
Length = 779
Score = 671 bits (347), Expect = 0.0
Identities = 369/379 (97%), Gaps = 5/379 (1%)
Strand = Plus / Minus
Query: 1 catataaggtattgctccaaccccctccccccaaacttcagaggtccactcatagctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 catataaggtattgctccaaccccctccccccaaacttcagaggtccactcatagctcct 631
Query: 61 tgccccaaaaaacttctcgtttgttgttgtttgtttgtttgtttgtttgtttgtttttaa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 630 tgccccaaaaaacttctcgtttgttgttg-----ttgtttgtttgtttgtttgtttttaa 576
Query: 121 gcacttcttgattggatccgatttgtgtggcccatgtactcctgagtttggaaatgttaa 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gcacttcttgactggatccgatttgtgtggcccatgtactcctgagtttggaaatgttaa 516
Query: 181 gactctccaagaacttctgacttctttctgctgttaaacagtttatttagttgggaaatt 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 515 gactctccaagaacttctgacttctttctgctgttaaacagtttatttagctgggaaatt 456
Query: 241 tataggatgatttttgtcctcttgttcttaggatttgtaacttggtagttcatgtcttgc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tataggatgatgcttgtcctcttgttcttaggatttgtaacttggtagttcatgtcttgc 396
Query: 301 acatacattaggtcatttttacttatcacagttggcattcactgcgacactggaaatata 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 395 acatacattaggtcatttttacttatcacagttggcattcactgtgacactggaaatata 336
Query: 361 ccccattatttcttttcct 379
|||||||||||||||||||
Sbjct: 335 ccccattatttcttttcct 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
