Query= MSMg01no405_k14.b1 MSMg01no405_k14.b1 CHROMAT_FILE:
MSMg01no405_k14.b1 PHD_FILE: MSMg01no405_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:42 2005
(452 letters)
>mm_chr13_107027394_107028245
Length = 852
Score = 793 bits (410), Expect = 0.0
Identities = 425/430 (98%)
Strand = Plus / Minus
Query: 23 tcagtgctgtaaaatattgtccttccagagaaaaagaatatttttcttgttctgtctgta 82
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 652 tcagtgctgtaaaatattgtccttccagagaaaaagaatttttttcttgttctgtctgta 593
Query: 83 acttacattgtttcagtgttgattttaactttaagatacacatttacctgccatgcttcg 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 592 acttacattgtttcagtgttgattttaactttaagatacacatttacctgccatgctgca 533
Query: 143 caactttcatctaatttccagggatttgttagcataatctatattttgaaggtttcatta 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 caactttcatctaatttccagggatttgttagcataatctatattttgaaggtttcatta 473
Query: 203 tgtatgatttttgcttaatctaccataaaaatccattttgtagactaggcatgaaaataa 262
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tatatgatttttgcttaatctaccataaaaatccattttgtagactaggcatgaaaataa 413
Query: 263 tttataatacattctttatgagaaacagtagatagcaccttggtatatgaatgcttatta 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttataatacattctttatgagaaacagtagatagcaccttggtatatgaatgcttatta 353
Query: 323 atctttctagtcattttaaaatttaaaagtaaatcattccaatttttttatataagcccc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atctttctagtcattttaaaatttaaaagtaaatcattccaatttttttatataagcccc 293
Query: 383 agaatttaccagtcagttatgttttaataaaatcagtaagctgcagttgggttttcacaa 442
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 292 agaatttaccagtcagttatgttttaataaaatcagtaggctgcagttgggttttcacaa 233
Query: 443 ataatttgta 452
||||||||||
Sbjct: 232 ataatttgta 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_k14.g1 MSMg01no405_k14.g1 CHROMAT_FILE:
MSMg01no405_k14.g1 PHD_FILE: MSMg01no405_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:43 2005
(340 letters)
>mm_chr13_106797428_106798168
Length = 741
Score = 592 bits (306), Expect = e-173
Identities = 333/342 (97%), Gaps = 2/342 (0%)
Strand = Plus / Plus
Query: 1 actggcataattagaactcacgaggaaaaa-gtatacaaagagaatattatttttaaaaa 59
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 200 actggcataattagaactcatgaggaaaaaagtatacaaagagaatattatttttaaaaa 259
Query: 60 gttcccttgtgaaatttttaaaaaagaaattttatttatatatgatgctaaaggtttaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttcccttgtgaaatttttaaaaaagaaattttatttatatatgatgctaaaggtttaat 319
Query: 120 attttcaaaccccatattttgtggggatgtgtgagtagtcatttttcttttcctttctag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attttcaaaccccatattttgtggggatgtgtgagtagtcatttttcttttcctttctag 379
Query: 180 gttgagctcaaggccacacacatgcgagtcatgtatttatgcctaatctacaacttttac 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 380 gttgagctcaaggccacacacatgcgagtcatgtatttatgcctaatctacgacttttac 439
Query: 240 tttatataattgatattgtcaccttcc-tcaaggtggcttatattatgtaagtgaacctt 298
|||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 tttaaataattgatactgtcaccttccctcaaggtggcttatattatgtaagtgaacctt 499
Query: 299 aaaactctactccacttagtcttatttacattgttttcagag 340
||||||||||||||| |||| ||||||||||||| |||||||
Sbjct: 500 aaaactctactccacctagtattatttacattgtcttcagag 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 741
Length adjustment: 9
Effective length of query: 331
Effective length of database: 732
Effective search space: 242292
Effective search space used: 242292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
