Query= MSMg01no406_f09.b1 MSMg01no406_f09.b1 CHROMAT_FILE:
MSMg01no406_f09.b1 PHD_FILE: MSMg01no406_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:36 2005
(190 letters)
>mm_chr13_55948839_55949429
Length = 591
Score = 313 bits (162), Expect = 3e-90
Identities = 183/196 (93%), Gaps = 11/196 (5%)
Strand = Plus / Minus
Query: 1 tcccttctatcagtaaaacatccatctcttgctcggccttaagatccagtaagatcttga 60
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 391 tcccttctatcggtaaaacatccatctcttgctcggcctaaagatccagtaagatcttga 332
Query: 61 agtgtgcttgcctgcagaaagaactgctgctgcccttgagattagaggctggctgtcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agtgtgcttgcctgcagaaagaactgctgctgcccttgagattagaggctggctgtcttt 272
Query: 121 tatcc------tttttgaagagagagccaagagagcactccaggttccatgcctgcttcc 174
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tatccaacaag-----gaagagagagccaagagagcactccaggttccatgcctgcttcc 217
Query: 175 tcgcagaaccctgtcg 190
||||||||||||||||
Sbjct: 216 tcgcagaaccctgtcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 591
Length adjustment: 8
Effective length of query: 182
Effective length of database: 583
Effective search space: 106106
Effective search space used: 106106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no406_f09.g1 MSMg01no406_f09.g1 CHROMAT_FILE:
MSMg01no406_f09.g1 PHD_FILE: MSMg01no406_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:36 2005
(240 letters)
>mm_chr13_55783324_55783963
Length = 640
Score = 391 bits (202), Expect = e-113
Identities = 231/242 (95%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 1 cctagagttgatttttggctgttgtaaatggaagcccagtcttgacttgggaggtttatg 60
||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 201 cctagagttgatttttggctgttgtaaatggaagcgcagtcttgactt--gaggtttatg 258
Query: 61 aatgtgcccagccttctgtagggtctgcggctgccttttggtttgttttggttttttttt 120
||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||
Sbjct: 259 aatgtgcccagccttctgtagagtctgcggctgctttttggtttgttttgtttttttttt 318
Query: 121 --aactttacattccatatactctgtgagtgactgtttgttttttcatatgtgtccgctg 178
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 319 taaactttacattccatatactctgtgcgtgactgtttgttctttcatatgtgtccgctg 378
Query: 179 tggcttggatgtgggggttgggaaacaggtcccaggagttggaactgtgcctctgccaga 238
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 379 tggcttggatgtgggggttgggaaacgggtcccaggagttggaactgtgcctctgccaga 438
Query: 239 gg 240
||
Sbjct: 439 gg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
