Query= MSMg01no406_p21.b1 MSMg01no406_p21.b1 CHROMAT_FILE:
MSMg01no406_p21.b1 PHD_FILE: MSMg01no406_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:30 2005
(526 letters)
>mm_chr13_73118353_73119272
Length = 920
Score = 909 bits (470), Expect = 0.0
Identities = 510/526 (96%), Gaps = 6/526 (1%)
Strand = Plus / Plus
Query: 1 ctgtatcccaggtgaagacaccacagggtgaagacagtcacacaagaggatctaactcta 60
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 201 ctgtatcccaggtgaagacaccacaggatgaagacagtcacacaagaggctctaactcta 260
Query: 61 aagtaaggttgctctctggaataaatttttcttttatcctaaccaacttaaaaaaaaaac 120
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 261 aagtaaggttgctctctggaataaatttttcttttatcttaaccaactt-aaaaaaaaac 319
Query: 121 acgtaaaaattgacttttttttcttatcatataggatgtctttgttcaaaagccaaattg 180
|| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 acttaaaaatggacttttttttcttatcatataggacgtctttgttcaaaagccaaattg 379
Query: 181 ggaccagtatcccactttggggtcagtatgctggagggatgtgaaacaaagttgatataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaccagtatcccactttggggtcagtatgctggagggatgtgaaacaaagttgatataa 439
Query: 241 attaaattagtaactgaatatcaagtaaaacctttgcccccttgggattctctagtattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attaaattagtaactgaatatcaagtaaaacctttgcccccttgggattctctagtattt 499
Query: 301 tccctttaaagtgctacccaaatgtacaggtatgaataattttcatttttacaaaaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccctttaaagtgctacccaaatgtacaggtatgaataattttcatttttacaaaaacta 559
Query: 361 ttaatggtaaagatatttaagcaatcacacaaaagagtaacaaattcatgtgtgagtagt 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 560 ttaatggtaaagatatttaagcaatcacacaaaagagtgacaaattcatgtgtgagtagt 619
Query: 421 ggagagaccaataatgcttgctgatatgagaggctgctgaaaggacatggcccccacagg 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggagagaccaatcatgcttgctgatatgagaggctgctgaaaggacatggcccccacagg 679
Query: 481 agtgaggcacttgtagtgggcctcaggtgaagggcagcccctgtga 526
|| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 680 ag-----cacttgtagtgggcctcgggtgatgggcagcccctgtga 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 920
Length adjustment: 10
Effective length of query: 516
Effective length of database: 910
Effective search space: 469560
Effective search space used: 469560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_p21.g1 MSMg01no406_p21.g1 CHROMAT_FILE:
MSMg01no406_p21.g1 PHD_FILE: MSMg01no406_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:30 2005
(469 letters)
>mm_chr13_73289679_73290547
Length = 869
Score = 799 bits (413), Expect = 0.0
Identities = 455/469 (97%)
Strand = Plus / Minus
Query: 1 caggcttgaagtgacactgttcccttagtcagcagctctcatttctgaacctagacaccc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 caggcttgaagtgacacagttcccttagtcagcagctctcatttctgaacctagacaccc 610
Query: 61 caagggatgaagtggccaactgacctgttttcagccacctggtgactgcaagatgaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 caagggatgaagtggccaactgacctgttttcagccacctggtgactgcaagatgaatgc 550
Query: 121 agagacactagggcctcttatttcttcataactcattcaaaattcctgacattatggggc 180
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 549 agagacactagggcctcttaaatcttcacgactcattcaaaattcctgacattatggggc 490
Query: 181 tggaccagacctgggatgacagttatgtataacaattcactttcaggtatattagtaacc 240
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 489 tggaccagacctaggatgacagttatgtatagcaattcactttcaggtatattagtaacc 430
Query: 241 atatagaatgtcatagataagcattatttttttctataactgtggagtgaagaataaaca 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 429 atatagaatgtcatagataagcattatttttttctataactgtggagtgacgaataaaca 370
Query: 301 acatacagatacagcatacagcctgagacttcctttctaaagaactggtatgacaacctt 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 acatacagatacaacatacagcctgagacttcctttctaaagaactggtatgacaacctt 310
Query: 361 gaaatgccaagtcaggaaacagacacacccaactcaaggccagccagggcagggggtcca 420
|||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 309 gaaatgccgagtcaggaaacagacacacccaactcaaggccagcctgggcaggtggtcca 250
Query: 421 cctctgtgtcacctatacatgggccccctctgcagcctgagtgagagta 469
|||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 249 cctctgtgtcgcctatacatgggccccctctgcagtctgagtgagagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
