Query= MSMg01no407_j17.b1 MSMg01no407_j17.b1 CHROMAT_FILE:
MSMg01no407_j17.b1 PHD_FILE: MSMg01no407_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:17 2005
(575 letters)
>mm_chr13_59057663_59058637
Length = 975
Score = 1023 bits (529), Expect = 0.0
Identities = 566/583 (97%), Gaps = 11/583 (1%)
Strand = Plus / Minus
Query: 1 gtccttcaatttttacaagaaaagttatttaattttatcaacttataatttattagagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gtccttcaatttttacaagaaaagttatttaattttatcaacttataatttattagagac 897
Query: 61 atgtatatcaatgcaagtttcttttgtgcctcagtgctggattcttagtacgctgtagta 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 atgtaaatcaatgcaagtttcttttgtgcctcagtgctggattcttagtacgctgtagta 837
Query: 121 ggatggggtgctgggttcttagtacattgtagtggtgcggggtactgg-------gtaca 173
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 836 ggatggggtgctgggttcttagtacattgtagtggtgcggggtactgggtacttagtaca 777
Query: 174 ctgtcgtggtgtgga-gtactgggtacttagtaacgctgtcgtggtatagggtactggat 232
| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 776 c--tcgtggtgt-gaggtactgggtacttagtaacgctgtcgtggtataggttactggat 720
Query: 233 tcttagcgcgtgctagtagcatagagttgttctgacatttctgtctgacaggtgaggaag 292
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcttagtgcgtgctagtagcatagagttgttctgacatttctgtctgacaggtgaggaag 660
Query: 293 cctccctgctgatcatcaatgtggaccttcgaggaaggtgtgctagctcagacacagttc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cctccctgctgatcatcaatgtggaccttcgaggaaggtgtgctagctcagacacagttc 600
Query: 353 ctgagcacaccaccctcgtgaacaaacagcccctagacagagctgattattctcaagcat 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 599 ctgagcacaccaccctcgtgaacaaacagcccctagacagagctgattattctcacgcat 540
Query: 413 gtgtgaggagctgaaggcacagaaacccagccctgtgtgggatccacaccgtggttttag 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtgtgaggagctgaaggcacagaaacccagccctgtgtgggatccacaccgtggttttag 480
Query: 473 aattagggtgtagagcctaggcagcccaacctcagagttgggcaatggttgcttacaacc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aattagggtgtagagcctaggcagcccaacctcagagttgggcaatggttgcttacaacc 420
Query: 533 accaaacccctggtttgaggcacaacctcacctccggatgccc 575
||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 419 accaaactcctggtttgaggcacaacctcgcctccggatgccc 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_j17.g1 MSMg01no407_j17.g1 CHROMAT_FILE:
MSMg01no407_j17.g1 PHD_FILE: MSMg01no407_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:17 2005
(490 letters)
>mm_chr13_58879335_58880224
Length = 890
Score = 917 bits (474), Expect = 0.0
Identities = 486/490 (99%)
Strand = Plus / Plus
Query: 1 tttgattctaacccagtagatggtgagcacagaagcagccctgggaagccgcgcagcggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tttgattctaacccagtagatggtgagcacagaagcagccctgggaagccgcacagcggc 260
Query: 61 tactcctttgtgttcgcgtcagacagtgatctaggcgctcttcccaaaggcatttagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactcctttgtgttcgcgtcagacagtgatctaggcgctcttcccaaaggcatttagcac 320
Query: 121 tggctaatatttacagtcagtggaaccgaattaacacgaaaatgtctttgcgcgtgggtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tggctaatatttacagtcagtggaaccgaattaacacgaaaatgtctttgcgtgtgggtg 380
Query: 181 ggcctcctccaatcagctcaagaggcttaaggacaaagcccaagatttccctaagaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcctcctccaatcagctcaagaggcttaaggacaaagcccaagatttccctaagaaggg 440
Query: 241 atgaggctcacccgtgggttgcaagcccaaactcctggctcagtgtctggcctgcttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaggctcacccgtgggttgcaagcccaaactcctggctcagtgtctggcctgcttctc 500
Query: 301 tgtcgtgcaggttttaaacttgcctgggcagacccacacctcaggacccaatctctccac 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tgtcgtgcaggttttaaacttgcctgggcagacccacacctcaaaacccaatctctccac 560
Query: 361 cccttctgtctcaagtatggatgtaaacatagatacgctcacatctccttctgctctgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccttctgtctcaagtatggatgtaaacatagatacgctcacatctccttctgctctgtc 620
Query: 421 tctctgtggaatcctgggtgatgcttccatgccaaagtgtgatgtatagttaaaaaactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctgtggaatcctgggtgatgcttccatgccaaagtgtgatgtatagttaaaaaactc 680
Query: 481 acagcaatca 490
||||||||||
Sbjct: 681 acagcaatca 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
