MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-408I05
Chromosome	13 (Build37)
Map Location	64,337,849 - 64,338,096
singlet/doublet	singlet
Overlap gene	Cdc14b
Upstream gene	2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik, EG665575, Hsd17b3, Slc35d2, Zfp367, Habp4
Downstream gene	1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f
Link	Open Mouse BAC browser

Click to get alignment info.

name	2010111I01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72061 MGI:1919311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fancc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14088 MGI:95480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ptch1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19206 MGI:105373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C030010C08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77329 MGI:1924579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs

name	0610007P08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76251 MGI:1923501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9330134C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432766 MGI:3689365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665575 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665575 MGI:3649134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 153 ESTs, 11 Proteins pseudo : _no_value

name	Hsd17b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15487 MGI:107177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70484 MGI:1917734
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp367 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238673 MGI:2442266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Habp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56541 MGI:1891713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdc14b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218294 MGI:2441808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110018J18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66129 MGI:1913379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctsl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13039 MGI:88564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccrk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105278 MGI:2145349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 15 ESTs, 1 Protein pseudo : _no_value

name	1190003K10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68880 MGI:1916130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC218298 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218298
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppia-ps13_866.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:544940
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 13_866.1 pseudo : _no_value

name	LOC238678 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:238678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins pseudo : _no_value

name	LOC631470 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 48 ESTs, 5 Proteins pseudo : _no_value

name	Cntnap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238680 MGI:3588199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432767 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432767 MGI:3643793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 185 ESTs, 8 Proteins

name	4930458L03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78124 MGI:1925374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC218301 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 76 ESTs, 3 Proteins pseudo : _no_value

name	LOC628515 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	4932441B19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238683 MGI:3588241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm274 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218304 MGI:2685120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	Hiatl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66631 MGI:1913881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100042311 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 69 ESTs, 3 Proteins

name	Olfr465-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258419 MGI:3030299
definition	gene_synonym : MOR218-3 note : olfactory receptor 465, pseudogene 1 pseudo : _no_value

name	Olfr466 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258816 MGI:3030300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nlrp4f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97895 MGI:2145528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010111I01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801682 GeneID:72061 MGI:1919311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010111I01 gene transcript_id : NM_028079.2

name	Fancc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185911 GeneID:14088 MGI:95480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group C transcript_id : NM_001042673.1

name	Fancc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185908 GeneID:14088 MGI:95480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group C transcript_id : NM_007985.2

name	Ptch1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130558 GeneID:19206 MGI:105373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : patched homolog 1 transcript_id : NM_008957.2

name	C030010C08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395200 GeneID:77329 MGI:1924579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs product : RIKEN cDNA C030010C08 gene transcript_id : XM_977840.1

name	0610007P08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91807127 GeneID:76251 MGI:1923501
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610007P08 gene transcript_id : NM_023507.3

name	9330134C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62000691 GeneID:432766 MGI:3689365
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9330134C04 gene transcript_id : NM_001013608.1

name	Hsd17b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356107 GeneID:15487 MGI:107177
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid (17-beta) dehydrogenase 3 transcript_id : NM_008291.2

name	Slc35d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369904 GeneID:70484 MGI:1917734
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member D2 transcript_id : NM_001001321.3

name	Zfp367 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802889 GeneID:238673 MGI:2442266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 367 transcript_id : NM_175494.3

name	Habp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368451 GeneID:56541 MGI:1891713
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hyaluronic acid binding protein 4 transcript_id : NM_019986.2

name	Cdc14b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982553 GeneID:218294 MGI:2441808
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC14 cell division cycle 14 homolog B (S. cerevisiae) transcript_id : NM_172587.2

name	1110018J18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385356 GeneID:66129 MGI:1913379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110018J18 gene transcript_id : NM_025370.2

name	Ctsl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377841 GeneID:13039 MGI:88564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin L transcript_id : NM_009984.3

name	Ccrk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26892296 GeneID:105278 MGI:2145349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell cycle related kinase transcript_id : NM_053180.2

name	1190003K10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395203 GeneID:68880 MGI:1916130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190003K10 gene transcript_id : XM_893191.2

name	Cntnap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487466 GeneID:238680 MGI:3588199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 3 transcript_id : NM_001081129.1

name	EG432767 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264306 GeneID:432767 MGI:3643793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 185 ESTs, 8 Proteins product : predicted gene, EG432767 transcript_id : XM_484271.5

name	4930458L03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56961609 GeneID:78124 MGI:1925374
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930458L03 gene transcript_id : NM_030047.1

name	4932441B19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801795 GeneID:238683 MGI:3588241
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932441B19 gene transcript_id : NM_001083890.1

name	Gm274 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38074761 GeneID:218304 MGI:2685120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : gene model 274, (NCBI) transcript_id : XM_138671.2

name	Hiatl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370885 GeneID:66631 MGI:1913881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hippocampus abundant transcript-like 1 transcript_id : NM_001083901.1

name	Hiatl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349202 GeneID:66631 MGI:1913881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hippocampus abundant transcript-like 1 transcript_id : NM_133680.3

name	LOC100042311 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264314 GeneID:100042311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 69 ESTs, 3 Proteins product : similar to G protein gamma-5 subunit transcript_id : XM_001478277.1

name	Olfr466 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583650 GeneID:258816 MGI:3030300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 466 transcript_id : NM_146819.2

name	Nlrp4f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140972010 GeneID:97895 MGI:2145528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, pyrin domain containing 4F transcript_id : NM_175290.4

name	2010111I01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625916 GeneID:72061 MGI:1919311
definition	GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004179 - membrane alanyl aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA] [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence ISS] [Evidence IEA] codon_start : 1 product : aminopeptidase O protein_id : NP_082355.1

name	Fancc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185912 GeneID:14088 MGI:95480
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0007281 - germ cell development [Evidence IMP]; GO:0006289 - nucleotide-excision repair [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : Fanconi anemia, complementation group C protein_id : NP_001036138.1

name	Fancc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185909 GeneID:14088 MGI:95480
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0007281 - germ cell development [Evidence IMP]; GO:0006289 - nucleotide-excision repair [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : Fanconi anemia, complementation group C protein_id : NP_032011.2

name	Ptch1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679519 CCDS:CCDS26592.1 GeneID:19206 MGI:105373
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015485 - cholesterol binding [Evidence TAS]; GO:0008158 - hedgehog receptor activity [Evidence TAS]; GO:0008201 - heparin binding [Evidence IDA]; GO:0005113 - patched binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence NAS] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0040015 - negative regulation of body size [Evidence IMP]; GO:0001841 - neural tube formation [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0016485 - protein processing [Evidence IMP]; GO:0043109 - regulation of smoothened activity [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007224 - smoothened signaling pathway [Evidence IGI] codon_start : 1 note : Patched 1; mesenchymal dysplasia; Ptch1 protein +12b product : patched protein_id : NP_032983.1

name	C030010C08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395201 GeneID:77329 MGI:1924579
definition	codon_start : 1 product : hypothetical protein LOC77329 protein_id : XP_982934.1

name	0610007P08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91807128 GeneID:76251 MGI:1923501
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA] codon_start : 1 note : putative repair and recombination helicase RAD26L product : RAD26L hypothetical protein protein_id : NP_075996.2

name	9330134C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000692 CCDS:CCDS26593.1 GeneID:432766 MGI:3689365
definition	codon_start : 1 product : stretch responsive protein 278 protein_id : NP_001013626.1

name	Hsd17b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680285 CCDS:CCDS26594.1 GeneID:15487 MGI:107177
definition	GO_function : GO:0004303 - estradiol 17-beta-dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation function : this enzyme has 17-keto-steroid reductase activity note : hydroxysteroid 17-beta dehydrogenase 3; 17(beta)HSD type 3 product : hydroxysteroid (17-beta) dehydrogenase 3 protein_id : NP_032317.1

name	Slc35d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625735 CCDS:CCDS26595.1 GeneID:70484 MGI:1917734
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter protein_id : NP_001001321.2

name	Zfp367 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425244 CCDS:CCDS26596.1 GeneID:238673 MGI:2442266
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 product : zinc finger protein 367 protein_id : NP_780703.1

name	Habp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910300 GeneID:56541 MGI:1891713
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA] GO_function : GO:0005540 - hyaluronic acid binding [Evidence ISS] GO_process : GO:0030212 - hyaluronan metabolism [Evidence ISS] codon_start : 1 exception : unclassified translation discrepancy note : intracellular hyaluronan-binding protein p57; hyaluronic acid-binding protein 4 (intracellular) product : hyaluronic acid binding protein 4 protein_id : NP_064370.1

name	Cdc14b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982554 CCDS:CCDS26598.1 GeneID:218294 MGI:2441808
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CDC14 cell division cycle 14 homolog B protein_id : NP_766175.2

name	1110018J18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384744 CCDS:CCDS26599.1 GeneID:66129 MGI:1913379
definition	codon_start : 1 product : hypothetical protein LOC66129 protein_id : NP_079646.1

name	Ctsl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753558 CCDS:CCDS26600.1 GeneID:13039 MGI:88564
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0008129 - actinidain activity [Evidence IEA]; GO:0004217 - cathepsin L activity [Evidence IEA]; GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence TAS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : furless; nackt; Cat L; major excreted protein product : cathepsin L preproprotein protein_id : NP_034114.1

name	Ccrk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716469 CCDS:CCDS26601.1 GeneID:105278 MGI:2145349
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA] codon_start : 1 note : CDK-related protein kinase PNQLARE; cell cycle-related kinase product : cell cycle related kinase protein_id : NP_444410.1

name	1190003K10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950877 GeneID:68880 MGI:1916130
definition	codon_start : 1 product : hypothetical protein LOC68880 protein_id : XP_898284.1

name	Cntnap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487467 GeneID:238680 MGI:3588199
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : cell recognition molecule Caspr3 product : contactin associated protein-like 3 protein_id : NP_001074598.1

name	EG432767 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51767751 GeneID:432767 MGI:3643793
definition	codon_start : 1 product : similar to Eukaryotic translation initiation factor 1 (eIF1) (Protein translation factor SUI1 homolog) protein_id : XP_484271.1

name	4930458L03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56961610 CCDS:CCDS26602.1 GeneID:78124 MGI:1925374
definition	codon_start : 1 exception : mismatches in translation note : acrosome-specific protein VAD1.3 product : hypothetical protein LOC78124 protein_id : NP_084323.1

name	4932441B19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:141801796 GeneID:238683 MGI:3588241
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC238683 protein_id : NP_001077359.1

name	Gm274 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38074762 GeneID:218304 MGI:2685120
definition	codon_start : 1 product : similar to LOC527795 protein protein_id : XP_138671.2

name	Hiatl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:142370886 GeneID:66631 MGI:1913881
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015520 - tetracycline:hydrogen antiporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0015904 - tetracycline transport [Evidence IEA] codon_start : 1 product : hippocampus abundant transcript-like 1 protein_id : NP_001077370.1

name	Hiatl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:142349203 CCDS:CCDS26603.1 GeneID:66631 MGI:1913881
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015520 - tetracycline:hydrogen antiporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0015904 - tetracycline transport [Evidence IEA] codon_start : 1 product : hippocampus abundant transcript-like 1 protein_id : NP_598441.3

name	LOC100042311 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264315 GeneID:100042311
definition	codon_start : 1 product : similar to G protein gamma-5 subunit protein_id : XP_001478327.1

name	Olfr466 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583651 CCDS:CCDS26604.1 GeneID:258816 MGI:3030300
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PB7A-3051266-3052192; olfactory receptor MOR209-1 product : olfactory receptor 466 protein_id : NP_667030.2

name	Nlrp4f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:140972011 GeneID:97895 MGI:2145528
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : NACHT, leucine rich repeat and PYD containing 4F product : NALP, kappa protein_id : NP_780499.3

name	LOC218298 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:218298
definition	number : 1 pseudo : _no_value

name	LOC628515 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628515
definition	number : 1 pseudo : _no_value

name	LOC628515 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628515
definition	number : 2 pseudo : _no_value

name	EG665575 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264300 GeneID:665575 MGI:3649134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 153 ESTs, 11 Proteins product : predicted gene, EG665575 pseudo : _no_value transcript_id : XR_001751.2

name	LOC665612 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264301 GeneID:665612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 15 ESTs, 1 Protein product : similar to glucocorticoid receptor AF-1 coactivator-1 pseudo : _no_value transcript_id : XR_033575.1

name	LOC238678 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264304 GeneID:238678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to Methylmalonic aciduria (cobalamin deficiency) type A pseudo : _no_value transcript_id : XR_033589.1

name	LOC631470 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264305 GeneID:631470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 48 ESTs, 5 Proteins product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_033597.1

name	LOC218301 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264309 GeneID:218301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 76 ESTs, 3 Proteins product : similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudo : _no_value transcript_id : XR_033616.1

clone name	MSMg01-416F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-332J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-277O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192A07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-317D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440L14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-408I05.T7 (MSMg01no408_i05.b1)	MSMg01-408I05.TJ (MSMg01no408_i05.g1)
ACC	AG506214	AG506215
length	770	756
length of high quality (start - end)	256 (45 - 300)	428 (76 - 503)
definition	CHROMAT_FILE: MSMg01no408_i05.b1 PHD_FILE: MSMg01no408_i05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:24:31 2005	CHROMAT_FILE: MSMg01no408_i05.g1 PHD_FILE: MSMg01no408_i05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:24:31 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCCAGCCCTTTACAGGCAGAAGCAGGTGGGTCTTTTTAAATTCGAGGC TGGCCCTGGCCTGCATAGCAAGTTACAGGCAAGCCAAGGTAACATAGTGA GATCCTGCCTCTAAAGACAGCATCAAAACCAAAATGACTAAACATTTTTA GAGACACGTGTGAAGCCATCAGAAAAAAGTCAGAGAAGGAATCAAGAGTT TATTTTTTGTTTTTTGGGTTTTTTTGTTTTTGTTTTTGTTTTGTTTNTTT NTNTNTNTTTTTNNNTTTTTTTTTTTTTTTNNNNNNNNNNNNNTNTNNNN NTTTTTTTTTTTTTTTTNTTTNTTTNTTTTTTTTTTNTTTTTTNNTNNTT TNNTTTTTTTTTTNNNTNNNNNNTTNTTNTTTTTTTTTTTTTTTTTTTTT NTTTNTTNNTTTTNTNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTNTTT NTTTTTTTTTTTTTTTTTTNTTTTTTTNNTTTTTTTNTTTTTTTTTTTTT NTNTTTNTTNNTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTT TTTTTNTTTTNTTTTTNTTTTTTTTNNTNNNNTTTTTTTTTTTTTTTTTT TTTNNTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTNTNN NTTTTTTTTTNTTTNNTNTTTTTTTTTTTTTNTNNTTNTTNTTTTNTTTT TTTTTNNTTTTTTTTTNTTT	GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXAAGGCTAGCCCAGTCCACAAAGCAA GTTCCAGGACAGCCAGGGCTGCAGAAAAACTCTGTATTGAAAAACAAAAA TCAAACAAACAAAAAAGCCAAACAAACAAAAAATATCAAGTTATCTTTAA ATATCCAAAATTCACTTAACTGTGGCCTCTTTTGCTGGGTCTGGCAAGGC TTCCGAAGGGACAATATGACAAGGTTCCCCACCCACCTCCTCTGGAGCAG AGCCAGAAAGATGTGGATCTCCTCAAGAGCTGACAGATGCTCTAAGTAGA AAGCTTGTGTGCATAATAATGTACATGCTTTTCTCATGTTCCTCCTTCAG AGAACGCTCTCCCCGCGGCATGATTCCAGGAAGTGAGAATGTGTCTCAAG ATCTTCAGAAAAGCCCTGAAGGCTGTGGGAAAGAACTCCGAAAACATGAA TACACAAATCAGTATAAAGAACTGTTCTTTACAGGGTTTCTCAACTAGGC AAAATTAGGATGCCATATGAATTGTATGAGGGGCTTCCTGGACCCCCAAG AACAGAAGCAGCTGTACAAATGAGTCCGCTTAATTCGAAAGATATTATAG GATAACTTGTCTTCGCTCCATATACGAAAAAACCTTTTGATCCTAAAAAA TAAGGACACATTTATAATTTTAAACTCGCCTTAAATATACGTTTTATTTA TACATN
quality values	Open. Hide. 9 10 9 9 9 9 15 37 37 37 29 29 28 22 13 19 9 9 9 19 21 39 48 48 26 22 21 19 19 22 25 15 11 9 10 10 11 15 21 22 22 28 28 29 31 59 48 57 36 36 36 31 33 31 31 31 30 29 29 25 14 12 12 10 12 12 21 20 30 34 41 59 59 59 59 59 59 57 57 57 57 59 59 59 59 59 57 57 57 57 57 53 68 68 68 68 68 57 57 57 57 57 59 59 59 57 57 57 57 57 54 50 48 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 48 47 59 59 59 41 23 23 3 0 3 23 3 0 3 0 3 0 3 0 3 9 9 9 3 0 0 0 3 9 6 6 6 7 8 9 12 26 19 17 10 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 3 14 15 18 10 9 9 10 10 6 6 6 6 7 8 3 0 3 7 3 0 3 8 3 0 3 9 9 9 11 11 8 7 7 3 0 3 7 7 7 8 3 0 0 3 0 0 3 18 3 0 0 3 9 10 10 18 16 16 15 10 3 0 0 0 3 0 0 0 0 0 0 3 3 0 3 3 0 3 9 7 7 7 8 13 14 8 10 8 6 6 6 6 8 8 18 9 9 3 0 3 8 3 0 3 3 0 0 3 8 10 3 0 3 0 3 9 14 15 10 8 8 8 10 10 8 6 7 8 8 9 6 8 11 10 8 8 10 3 0 3 6 6 7 3 0 3 8 3 0 3 6 6 8 7 9 9 9 10 10 7 8 8 8 11 18 10 3 0 3 8 8 6 6 6 3 0 0 3 9 8 10 10 9 3 0 3 9 6 6 6 6 6 11 16 14 7 7 3 0 3 0 3 8 3 0 3 3 0 0 3 0 0 0 3 9 6 8 8 7 9 9 21 13 12 9 8 8 8 10 10 10 12 11 10 9 7 8 6 6 7 6 8 7 3 0 3 10 15 10 9 9 9 3 0 3 23 23 3 0 3 6 6 6 3 0 3 23 19 18 11 11 11 3 0 0 3 0 0 0 0 3 11 11 11 11 11 7 6 6 6 7 7 8 7 7 7 7 7 7 7 3 0 0 3 3 0 0 3 6 8 10 8 8 8 7 7 7 10 10 10 8 6 6 6 6 7 8 8 8 10 8 9 9 18 23 8 3 0 3 9 6 8 8 3 0 3 0 0 0 3 8 8 10 10 8 8 8 3 0 3 6 3 0 0 3 0 3 8 6 9 9 9 8 8 7 6 8 14 3 0 3 0 0 3 3 0 3 3 0 3 8 10 3 0 3 10 11 22 21 12 11 11 3 0 0 3 11 12 22 12 9 7 7 3 0 3 6 6	Open. Hide. 8 8 11 11 8 8 8 8 15 16 28 23 26 24 20 25 33 28 37 39 39 39 39 39 39 39 44 44 37 23 23 11 9 9 12 12 9 10 9 10 10 22 19 32 31 33 44 37 39 47 47 47 53 53 53 53 50 50 33 25 17 11 18 17 18 11 12 12 22 17 29 29 31 33 33 41 47 47 57 57 57 57 57 53 53 53 53 53 53 53 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 68 43 48 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 57 59 59 59 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 52 52 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 44 39 33 27 23 20 20 20 27 38 43 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 59 59 59 54 54 59 59 59 68 68 68 68 68 68 59 59 48 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 59 59 47 46 46 48 59 59 59 57 48 48 57 57 57 57 57 57 57 50 53 57 48 48 48 48 48 57 59 59 48 48 48 48 40 40 33 26 27 19 24 25 34 37 37 37 30 30 37 37 34 37 31 39 31 31 31 37 37 39 39 40 41 59 43 32 29 27 32 33 37 30 37 32 30 24 17 17 17 30 30 37 34 24 18 14 14 14 14 15 28 30 30 10 10 10 12 16 24 34 39 39 31 31 18 15 8 8 8 15 19 25 25 11 11 12 23 17 24 26 25 15 14 16 13 12 10 10 10 10 8 8 15 15 6 6 6 6 8 6 10 10 22 22 28 28 32 20 15 9 9 9 11 11 14 13 8 8 8 8 8 8 10 15 16 21 10 10 10 10 14 16 14 14 21 12 19 11 11 11 17 12 10 8 8 8 8 8 10 11 12 16 16 11 11 10 13 10 8 8 8 6 6 6 8 8 6 6 8 8 8 8 8 8 8 6 8 6 6 8 6 8 8 8 9 13 10 8 8 6 6 8 6 6 6 6 6 7 10 8 8 8 8 13 10 12 10 9 10 10 9 9 8 11 8 6 6 6 8 6 11 12 12 15 11 11 12 13 8 8 8 8 15 11 12 12 12 13 12 16 14 13 10 11 12 11 11 11 10 10 10 10 10 12 12 12 15 9 9 9 10 10 10 10 8 8 6 6 8 8 8 9 9 9 9 9 10 11 11 11 11 10 9 9 9 9 7 7 9 9 9 9 9 9 10 8 10 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no408_i05.b1 MSMg01no408_i05.b1 CHROMAT_FILE:
MSMg01no408_i05.b1 PHD_FILE: MSMg01no408_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:31 2005
         (256 letters)



>mm_chr13_64337552_64338207
          Length = 656

 Score =  456 bits (236), Expect = e-133
 Identities = 245/248 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccagccctttacaggcagaagcaggtgggtctttttaaattcgaggctggccctg 64
           |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaattccagccctggaaaggcagaagcaggtgggtctttttaaattcgaggctggccctg 486

                                                                       
Query: 65  gcctgcatagcaagttacaggcaagccaaggtaacatagtgagatcctgcctctaaagac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcctgcatagcaagttacaggcaagccaaggtaacatagtgagatcctgcctctaaagac 426

                                                                       
Query: 125 agcatcaaaaccaaaatgactaaacatttttagagacacgtgtgaagccatcagaaaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agcatcaaaaccaaaatgactaaacatttttagagacacgtgtgaagccatcagaaaaaa 366

                                                                       
Query: 185 gtcagagaaggaatcaagagtttattttttgttttttgggtttttttgtttttgtttttg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtcagagaaggaatcaagagtttattttttgttttttgggtttttttgtttttgtttttg 306

                   
Query: 245 ttttgttt 252
           ||||||||
Sbjct: 305 ttttgttt 298


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space:   159809
Effective search space used:   159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information