Query= MSMg01no410_d01.b1 MSMg01no410_d01.b1 CHROMAT_FILE:
MSMg01no410_d01.b1 PHD_FILE: MSMg01no410_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:51 2005
(607 letters)
>mm_chr13_76744854_76745860
Length = 1007
Score = 1112 bits (575), Expect = 0.0
Identities = 593/601 (98%), Gaps = 4/601 (0%)
Strand = Plus / Plus
Query: 7 gaattcacagcttggaaaagtgaagtctgatgttttaagtatctgaaaacacttggatat 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcacagcttggaaaagtgaagtctgatgttttaagtatctgaaaacacttggatac 266
Query: 67 gatagagacaaggctcaagtgcacatgtgttatgttatatctcaaatccagggcactaca 126
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gatagagacaaggctcaaatgcacatgtgttatgttatatctcaaatccagggcactaca 326
Query: 127 gaactatgttacttagaaatacatagaggttcagtagagcatcacttggaaaatgcactt 186
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaactatgttacttaaaaatacatagaggttcagtagagcatcacttggaaaatgcactt 386
Query: 187 ttagtcagattttctaggctcaaacacaaacataactttttatttagcccgaacttttta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttagtcagattttctaggctcaaacacaaacataactttttatttagcccgaacttttta 446
Query: 247 tttattcttcttatctttgtagactcatacttacaaagattaaatcaggcagtattttag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttattcttcttatctttgtagactcatacttacaaagattaaatcaggcagtattttag 506
Query: 307 aaattttggaaagtgcctggcatatactattcaataaattgttactactatgaactattt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaattttggaaagtgcctggcatatactattcaataaattgttactactatgaactattt 566
Query: 367 ttcaatattcaatacttctggagttattaaagtcttttacatcaatgaatatataaacaa 426
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 567 ttcaatattcaatacttctggagttattaaagtcttttacatcgatgaatatataaacaa 626
Query: 427 atgattaagcacttataaatatgttacagtaaataaaagttaataataatattgtttaat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atgattaagcacttataaatatgttacagtaaataaaagttaataataatattgtttaat 686
Query: 487 tccaaagtagaattacaaatgggttcagtaaatgaagttaaaaatattaacaaaatatga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tccaaagtagaattacaaatgggttcagtaaatgaagttaaaaatattaacaaaatatga 746
Query: 547 acattccattgtaaatttaattcttcaaaccaaaagaaaataccccccccccattaccca 606
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 747 acattccattgtaaatttaattcttcaaaccaaaagaaaatacccccc----attaccca 802
Query: 607 t 607
|
Sbjct: 803 t 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_d01.g1 MSMg01no410_d01.g1 CHROMAT_FILE:
MSMg01no410_d01.g1 PHD_FILE: MSMg01no410_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:51 2005
(598 letters)
>mm_chr13_76871227_76872224
Length = 998
Score = 1156 bits (598), Expect = 0.0
Identities = 598/598 (100%)
Strand = Plus / Minus
Query: 1 cagaaaatattcagcaactttctccagtatgtgccttttgagtcctggtcttttggtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 cagaaaatattcagcaactttctccagtatgtgccttttgagtcctggtcttttggtgaa 739
Query: 61 ttatctctttgttgtcagcagtctaagaactggaaagtagctaactgtacataagaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttatctctttgttgtcagcagtctaagaactggaaagtagctaactgtacataagaagta 679
Query: 121 cttcataaagcagatgaagacaccatagcaaacataaaacagtacttttatacatatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cttcataaagcagatgaagacaccatagcaaacataaaacagtacttttatacatatttt 619
Query: 181 cttaattcccccccaaaagggaagatgatgaaattgaataacaagtaacagcatgatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cttaattcccccccaaaagggaagatgatgaaattgaataacaagtaacagcatgatttg 559
Query: 241 atcagaatggaaaaagaaagattgccaatgttccagggtctaaaaaaatcagaattatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atcagaatggaaaaagaaagattgccaatgttccagggtctaaaaaaatcagaattatta 499
Query: 301 aaagcaatattgaccttttaagtaaaattttgaataaatgtcagttttaccaaggaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaagcaatattgaccttttaagtaaaattttgaataaatgtcagttttaccaaggaaatc 439
Query: 361 tgatttgtttcaaagcacagtcatataaaagttcagtttcatcttgatatttcgttcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgatttgtttcaaagcacagtcatataaaagttcagtttcatcttgatatttcgttcaag 379
Query: 421 agtggtactatcaccaaaggtactaaaagcttaatatgtgccttacatatctttagacgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agtggtactatcaccaaaggtactaaaagcttaatatgtgccttacatatctttagacgg 319
Query: 481 atatggaaagctcttgttctgggagtgagatgaggtactgagggagaattgtcctcaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atatggaaagctcttgttctgggagtgagatgaggtactgagggagaattgtcctcaagg 259
Query: 541 agccatgacagaacatatgagtttaaaaagtccatactcaattttccatgaaacaaaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agccatgacagaacatatgagtttaaaaagtccatactcaattttccatgaaacaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
