Query= MSMg01no410_e19.b1 MSMg01no410_e19.b1 CHROMAT_FILE:
MSMg01no410_e19.b1 PHD_FILE: MSMg01no410_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:00 2005
(576 letters)
>mm_chr13_110322942_110323917
Length = 976
Score = 1027 bits (531), Expect = 0.0
Identities = 561/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 7 gaattctctatttatc-tctgtaccccacgttttaatctgagtcatttgctttcttgata 65
|||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 207 gaattctctattta-catctgtaccccactttttaatctgagttatttgctttcttgata 265
Query: 66 tctggtttcttgagtcctctctatttggatattagccttctatcagatatgtagctgata 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tctggtttcttgagtcctctctatttggatattagccttctatcagatatgtagctgata 325
Query: 126 aaatcttttaccactctttaagttgctgctttgtctgaatgacggtgtcctttgccatgc 185
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 326 aaatcttttaccactctttaagttgctgctttgtctgaatgacagtgtcctttgccatgc 385
Query: 186 agaagcgtctcagtgtcatgaggagatccaatttattaatttgtgatcttaatccctgtg 245
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 386 agaagcgtctcagtgtcatgaggagatccagtttattaatttgtgatcttaatccctgtg 445
Query: 246 ctaatggtgttctgttcagaaagtcttttcctgtgtcaatacgtttaaggctattgccca 305
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 ctaatggtgttctgttcagaaagtcttttcctgtgccaatacgtttaaggctattgccca 505
Query: 306 cttgctcttacctccatggtctttgcttcagttcaggccctggtgtacttgttatgtgaa 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 506 cttgctcttacctccatggtctttgcttcagttcaggccctggtgtacttgttacgtgaa 565
Query: 366 gatgtaagatgaaataaacccctccctccccaagttgcttttgatcatggtatatatcac 425
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 566 gatgtaagatgaaataaacccctccctccccaagttgcttttgatcatggtctatatcac 625
Query: 426 agagacagaaaagcaaattaggacagagagtcagtatgtaccagtgatttttaagaccgt 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 626 agagacagaaaagcaaattaggacagagagtcagtatgtaccagtgatttttaagaccct 685
Query: 486 gtacacttttgactggcaagttggttacctttaactgcaacactcctctcacaagctatg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gtacacttttgactggcaagttggttacctttaactgcaacactcctctcacaagctatg 745
Query: 546 tgacactgggaatatcactcagtagctccag 576
|||||||||||||||||||||||||||||||
Sbjct: 746 tgacactgggaatatcactcagtagctccag 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_e19.g1 MSMg01no410_e19.g1 CHROMAT_FILE:
MSMg01no410_e19.g1 PHD_FILE: MSMg01no410_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:00 2005
(498 letters)
>mm_chr13_110444931_110445828
Length = 898
Score = 903 bits (467), Expect = 0.0
Identities = 491/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 1 accattctttagtaaataaccccttggg-attttttttcaggtgatgaaaatttatcttt 59
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 786 accattctttagtaaataaccccttgggaattttttttcaggtgatgaaaatttatcttc 727
Query: 60 aattttaattttctaattatattttatacatattctgaaaccccaggacagtaatctcat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aattttaattttctaattatattttatacatattctgaaaccccaggacagtaatctcat 667
Query: 120 taagtaaatacttatttttctgtctcacaatagaagcaatacaactgttaaaggatatat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 taagtaaatacttatttttctgtctcacaatagaagcaatacaactgttaaaggatatat 607
Query: 180 gtaaatctttaaacctggagaatttatttatgttggtacaaaatcaaggttcctgagatg 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 606 gtaaatctttaaacctggagaatttatttatgttggtgcaaaatcaaggttcctgagatg 547
Query: 240 gaaaaacattgctgattatttgaatgataaagatatcatgtgtttcgggctaagatattg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaaaaacattgctgattatttgaatgataaagatatcatgtgtttcgggctaagatattg 487
Query: 300 gatccttttttaggtacaatattcctaaaatgctgaatgttaccataaacttgatgtgat 359
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 486 gacccttttttaggtacaatattcataaaatgctgaatgttaccataaacttgatgtgat 427
Query: 360 cacattctttccaaagacatctaatgacagttggaggattagcaactccgaatggagcaa 419
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cgcattctttccaaagacatctaatgacagttggaggattagcaactccgaatggagcaa 367
Query: 420 ctagagttataattatataattatatgataatgaaagagactatctaagagagtttattt 479
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 366 ctagaattataattatataattatatgataatgaaagagtctatctaagagagtttattt 307
Query: 480 gaatttatttactggaagt 498
|||||||||||||||||||
Sbjct: 306 gaatttatttactggaagt 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
