Query= MSMg01no412_b10.b1 MSMg01no412_b10.b1 CHROMAT_FILE:
MSMg01no412_b10.b1 PHD_FILE: MSMg01no412_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:21 2005
(586 letters)
>mm_chr13_15727403_15728387
Length = 985
Score = 1069 bits (553), Expect = 0.0
Identities = 574/581 (98%), Gaps = 1/581 (0%)
Strand = Plus / Plus
Query: 6 gaattcacgcaagatgccgagaaacagcccatcctttcatgccagcgggagctccgtccg 65
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcacccaagatgcagagaaacagcccatcctttcatgccagcgggagctccgtccg 265
Query: 66 catttactgcagttttattgatagggccattgccatattactggaattctgtgctacagc 125
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 266 catttactacagttttattgataggaccattgccatattactggaattctgtgctacagc 325
Query: 126 atacgtggcatggtttatgtctggttttaggccagtttgaaatatcattgtttttctgca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atacgtggcatggtttatgtctggttttaggccagtttgaaatatcattgtttttctgca 385
Query: 186 tatgtgttgcttgttctttctaatatcagcaattgcgaacacacagttccagaatatgga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tatgtgttgcttgttctttctaatatcagcaattgcgaacacacagttccagaatatgga 445
Query: 246 ggcagagaaggactagtaaccgtcacttccagctcttacgtggatctactgagagtggat 305
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 446 ggcagagaaggactagtaaccgtcacttccagc-cttacgtggatctactgagagtggat 504
Query: 306 ctactgagagtggatctactgagagtggatctactgagagtgtaaaccaacagagacaag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctactgagagtggatctactgagagtggatctactgagagtgtaaaccaacagagacaag 564
Query: 366 ccttttttctttccttcttattgctacttcaattgaatactttttaaaacaagtttaaca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccttttttctttccttcttattgctacttcaattgaatactttttaaaacaagtttaaca 624
Query: 426 aatatttaccaagtcaagttcatgaaatacatccatttatatgtgttttgtggctgcctc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatatttaccaagtcaagttcatgaaatacatccatttatatgtgttttgtggctgcctc 684
Query: 486 tatatttccttatatacaattcatccctcctgtggtcactattttgattagtccctttaa 545
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatatttccttatacacaattcatccctcctgtggtcactattttgattagtccctttaa 744
Query: 546 acagcaatgtctgctaagtctgaagagtttaaccctctttc 586
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 745 acagcaatgtctgctaagtctaaagagtttaaccctctttc 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 985
Length adjustment: 10
Effective length of query: 576
Effective length of database: 975
Effective search space: 561600
Effective search space used: 561600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_b10.g1 MSMg01no412_b10.g1 CHROMAT_FILE:
MSMg01no412_b10.g1 PHD_FILE: MSMg01no412_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:21 2005
(421 letters)
>mm_chr13_15873356_15874176
Length = 821
Score = 814 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Minus
Query: 1 tcccaaccccttcagcactgtgaacaccctcacagaacttttataacaagctggaaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcccaaccccttcagcactgtgaacaccctcacagaacttttataacaagctggaaacct 562
Query: 61 tgtggttttttgttttttgttttcatcacgattgatatatgcgtatgtgtctggcaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtggttttttgttttttgttttcatcacgattgatatatgcgtatgtgtctggcaggtt 502
Query: 121 tattaacagcagattttagatgctaagataaagtttacataattgggacactcggcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattaacagcagattttagatgctaagataaagtttacataattgggacactcggcagat 442
Query: 181 taaaatatagacaggaagtttgctggaatgataaccatcctcctcctacttccacaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaatatagacaggaagtttgctggaatgataaccatcctcctcctacttccacaggga 382
Query: 241 tgtgatatgaagagcaagaagatgacaggatgtgaggcacaaatgtggaggctacaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgatatgaagagcaagaagatgacaggatgtgaggcacaaatgtggaggctacaagga 322
Query: 301 tccctgattgaagcatctcctcccaccctcactcctcagcaccaactctgcatcacggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctgattgaagcatctcctcccaccctcactcctcagcaccaactctgcatcacggat 262
Query: 361 aactgcaggacccctctgggagggtcaggaatgcctctgaatgagtcatgcttgaagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactgcaggacccctctgggagggtcaggaatgcctctgaatgagtcatgcttgaagact 202
Query: 421 a 421
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
