XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGCTCACTT
TACCAACTTCTGATGGTAGGGTCCTTATGCTAAGATCACGACACATCAAA
TAGAGATGATACCCAAAGGCCACTTGAACCTGACTGGCTTTTTCTCCTTC
TTTTGAGGCATCATTATCTTTCTATTGTGCATATTGTAAGTCTTCCCCAT
GTCAACAGCAGCCCTATATCACAGCACTCTTGGGTGGAGTGTGGTCTTGA
GACCATTTTAAACAAGGCAATTTCCCAATGAGTTTATAAAATGTATCAAG
GAGATGGATTGAAATGACCCCTCACACTTCTAGACAAGTCATTTGAAGGA
AACATGACACTTTAAAAAAATCACTCTCCTGTGACTTGAATACTTAAGAG
CTTTAAGGAAGAATACAGTTTTCACTTTGACTTGGTGACTGAGATGGGCA
CAGAATGTCTCCATGTATGATGAAAAGAGGTCACCCATGGGAGATAAACA
GTGAGTCCCTGAATCTTTCTTGTTAGATGGACCAGGAAGCACCCGTTGGA
CACAGTTGTGGGCTCCTGTTTTCTGAGATACGTGGGTAGGGCATGAGGAA
AGACACATCCTAAACACAGCAAGCACTGGCCCATGGGATATAAATTCTAA
TAACAATTAGAGTTAGCATGTTAGTCTCCATAAAGAATTCAGTTATAGTT
GTCATAAAGATTAAACCGAACTATAATCTGCAGATGAATCTCTACACG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTAGAAATCCTTTAATTTCTTTATTTTTGTCTTGACCCAAT
TTTAATTCATTACAGAGTTGTTCAGTTTCCATTAGTTTGTAAGTGTTCTG
TTGTTTTGATATCTAGCTTTAATCTGTGGTGATACAATGAAGAGAGTTAT
TTCAATTTTCTTGTATTGGCTGAAACTTGCTTTGTGACTAAGTATGTGGT
CAATTTTGGAGAAAATTTTATGAAGTGCATAGAAGAAAGTGTATTCTTTT
ATGTTTGGGTGAAATTTTCTACAAATATATATTAGCTCCATTTGGTTTAT
AACATCTACTAGCCCCAGTATTTCTCTGTTTAGTTTTTGTCCGAATGACC
TGTCTATTGGTGAGAGTGGAGTTTTGAAGTCTCTCACTATCTGTGTGTGA
GAGTTACATTGAAGTAGTCTTTATTTTACAAACCGGAGTGTTTTTGTATT
TGGAGCATAGATGTTAAGAATTGAAATGTCATCTTGGTGGACTTTTCCTT
TGATAAGGATGTAGCATTCTTCCCTATCTATTTTGATTAAATTTGTTTGA
AGTCTATTTTGTTAGGTATTAAAATGGGTATGGCCACTGGTTTTTTAGTT
CTTTTTACTGGGAAGGTTTTTTTTTTTCAATCCTTTCTCCAAAGAGAAGA
AAATTCTTTTTTGTGAAGTGGGGTCTTGCATATCCTCTGTAGGTGTTTAA
TGCCGTTCCTCTCTG

Query= MSMg01no413_c17.b1 MSMg01no413_c17.b1 CHROMAT_FILE:
MSMg01no413_c17.b1 PHD_FILE: MSMg01no413_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:46 2005
         (583 letters)



>mm_chr13_96836207_96837189
          Length = 983

 Score = 1104 bits (571), Expect = 0.0
 Identities = 580/583 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacttctgatggtagggtccttatgctaagatcacgacacatcaaatagagatgataccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttctgatggtagggtccttatgctaagatcacgacacatcaaatagagatgataccc 260

                                                                       
Query: 61  aaaggccacttgaacctgactggctttttctccttcttttgaggcatcattatctttcta 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggccactcgaacctgactggctttttctccttcttttgaggcatcattatctttcta 320

                                                                       
Query: 121 ttgtgcatattgtaagtcttccccatgtcaacagcagccctatatcacagcactcttggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgcatattgtaagtcttccccatgtcaacagcagccctatatcacagcactcttggg 380

                                                                       
Query: 181 tggagtgtggtcttgagaccattttaaacaaggcaatttcccaatgagtttataaaatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggagtgtggtcttgagaccattttaaacaaggcaatttcccaatgagtttataaaatgt 440

                                                                       
Query: 241 atcaaggagatggattgaaatgacccctcacacttctagacaagtcatttgaaggaaaca 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaaggagatggagtgaaatgacccctcacacttctagacaagtcatttgaaggaaaca 500

                                                                       
Query: 301 tgacactttaaaaaaatcactctcctgtgacttgaatacttaagagctttaaggaagaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacactttaaaaaaatcactctcctgtgacttgaatacttaagagctttaaggaagaat 560

                                                                       
Query: 361 acagttttcactttgacttggtgactgagatgggcacagaatgtctccatgtatgatgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagttttcactttgacttggtgactgagatgggcacagaatgtctccatgtatgatgaa 620

                                                                       
Query: 421 aagaggtcacccatgggagataaacagtgagtccctgaatctttcttgttagatggacca 480
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 aagaggtcacccatgggagataaacagtgtgtccctgaatctttcttgttagatggacca 680

                                                                       
Query: 481 ggaagcacccgttggacacagttgtgggctcctgttttctgagatacgtgggtagggcat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaagcacccgttggacacagttgtgggctcctgttttctgagatacgtgggtagggcat 740

                                                      
Query: 541 gaggaaagacacatcctaaacacagcaagcactggcccatggg 583
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaggaaagacacatcctaaacacagcaagcactggcccatggg 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)