XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TGTGTGTCTGTTAGGAGTTAGTGAGGTATCTAGACATATGAAGTCTAAAA
GTGACAGTATATCCCAAACCAGTGAATACATTTACAGTATGACCATTTGA
TTATCTTGTTTTATTTATGTAAGAGCACACTAGTTGGCCTCACAATTGCT
CCTGGTAGATATGTTAACATGGTTTCCACATCTGCTATGTAGGTAAATGT
GAGATTCCAGAGCGACTCAAGCCTTTCCTGTAGTCACTAAGGAAGTGTTG
ACACTGAATCGTTGAGCTCAGGTCTCAGTGTCACACACCATTTGGTTCAG
GTATCTTCGGAAGCCGAGGGCCCTCAATGCATTCCCCATCTACACTCTCC
CTCAAGGGCACTCCTCTATTTCTGGGTTTTGTGTCTGCATTTGGTGCCAA
AAGGTCCCAGATAATTTAGAGTTACAGAGCACCCCAGTGGTGGGATTCAG
GCTTCTCTCTGGTTCAGATATTGCTAAGTGCAGAAGGAGACTAGAGAGGT
AAAAAAAATGGGTTGAGAGAAAAGGTTCAAAGTAGGATCCGCCATGTTGG
TTCTGCCATGTTGATTTCACTATCTTTCTCTTATTATTGTTTCCAGCTTG
CTGCTCACCCTTCTCCTCTTAAATACAGACCTTTATGGAAAGGATGATGT
CTTTGTTCACTCTCTCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGGACCTTTGGAAAAGCAGTGAGAGTTCTTA
ACAGCTGAGCCATCTCTCCAGCCAGGACACAAAGCAATCTTAAGAGCTGG
CCCCATGCCCACCAGTAGATAGGCAACACAAAATGAACTCAATGGCATCT
TTGGAGACCCATGTGTCATAATATTTTGTCAGGGCATTATTTTAAACTTA
CAAGCCCTTTGCAAATTTTATAACATCTGGTTTTAGTTTTTGCGAGATTC
CCGTGAATGTGTATATGTGTGTCTCTGAGTATTTATATGTGTCTATATAT
GTGTGTATATATACGTGTATCTATACATTTGTATATATGTATTTATATGT
GTGTATATATGAGTGTCTAGATGTGTTTCTTATGTTTTCTTCTTTGGATT
TTTTTCTGTCCTTCCCAGTTTGCCTGGTTTTGTTTTTATCTTATTTTATT
TTACTTTATTTCATTATTATTCTCTAGAATGCCTGTTTATTTTCTAATCA
GAGACAGGAAGGATGTGAATTCTGATGANAGGGGAGGTGGTGGNNNNCTC
ATAGGAATTGTGAGAGGAAACTGTTATCAAAGCATACTGTTTTATTATAT
ATCTACTTGCTATAAAAGAATATTAGGATCTACTCCATCCCTACCCTCCT
TAAAGGAAGCCTCCTTAAAACAA

Query= MSMg01no415_k11.b1 MSMg01no415_k11.b1 CHROMAT_FILE:
MSMg01no415_k11.b1 PHD_FILE: MSMg01no415_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:06 2005
         (608 letters)



>mm_chr13_113234408_113235414
          Length = 1007

 Score = 1129 bits (584), Expect = 0.0
 Identities = 602/608 (99%), Gaps = 1/608 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggagttagtgaggtatctagacatatgaagtctaaaagtgacagtatatcccaaaccag 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aggagttagtaaggtatctagacatatgaagtctaaaagtgacagtatatcccaaaccag 748

                                                                       
Query: 61  tgaatacatttacagtatgaccatttgattatcttgttttatttatgtaagagcacacta 120
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgaatacatttacagtatgacc-gttgattatcttgttttatttatgtaagagcacacta 689

                                                                       
Query: 121 gttggcctcacaattgctcctggtagatatgttaacatggtttccacatctgctatgtag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gttggcctcacaattgctcctggtagatatgttaacatggtttccacatctgctatgtag 629

                                                                       
Query: 181 gtaaatgtgagattccagagcgactcaagcctttcctgtagtcactaaggaagtgttgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtaaatgtgagattccagagcgactcaagcctttcctgtagtcactaaggaagtgttgac 569

                                                                       
Query: 241 actgaatcgttgagctcaggtctcagtgtcacacaccatttggttcaggtatcttcggaa 300
           |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 actgaagcggtgagctcaggtctcagtgtcacacaccatttggttcaggtatcttcggaa 509

                                                                       
Query: 301 gccgagggccctcaatgcattccccatctacactctccctcaagggcactcctctatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gccgagggccctcaatgcattccccatctacactctccctcaagggcactcctctatttc 449

                                                                       
Query: 361 tgggttttgtgtctgcatttggtgccaaaaggtcccagataatttagagttacagagcac 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 448 tgggttttgtgtctgcatttggtgccaaaatgtcccagataatttagagttacagagcac 389

                                                                       
Query: 421 cccagtggtgggattcaggcttctctctggttcagatattgctaagtgcagaaggagact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cccagtggtgggattcaggcttctctctggttcagatattgctaagtgcagaaggagact 329

                                                                       
Query: 481 agagaggtaaaaaaaatgggttgagagaaaaggttcaaagtaggatccgccatgttggtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agagaggtaaaaaaaatgggttgagagaaaaggttcaaagtaggatccgccatgttggtt 269

                                                                       
Query: 541 ctgccatgttgatttcactatctttctcttattattgtttccagcttgctgctcaccctt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctgccatgttgatttcactatctttctcttattattgtttccagcttgctgctcaccctt 209

                   
Query: 601 ctcctctt 608
           ||||||||
Sbjct: 208 ctcctctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1007
Length adjustment: 10
Effective length of query: 598
Effective length of database: 997
Effective search space:   596206
Effective search space used:   596206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)