XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAG
GCCTACCTGAGCTGCATGAGGAAAGATCAAAGATAGAACTAGCTGTAGCT
GCTCACAGACTGGTACATGACTAATACTGTAAAACCCTATGGCATTTTGA
ATATAGTTACTAGGAGGAGGGAACTCTAAGCTTCTAGTGGTTACATTTTC
AGCCATGTGTGTACAGCATGACTGAAAAGAAAGTCAACATGGACAGAAGA
TATATTTCTGATCACAAATATTGAGCTCCTGTACCTACAAAAGTTCAAAG
TTGACTCCCATGAACATCTCAAAGGTTTCCTTGAAGATCTGCAACTAATA
TCTTCATCGTCTCATCCGTTTACTTAATACCAGAAGGCTTTGCTTTGCCA
GCAACTAGGAATTCTACTGTATTTTAATTCCTTTTTCACTGACAGCATAG
GGAGCAGTTGGCCCTTGTCCATGACACCAAACCCTCAATTTATAAAACCA
GATTATATGGTTTAAGAATCTGATCTTGACTACTTTCTGTTATAAAATAC
CTTGACCAAAGGCAGCTGAGGAGATGGAAGAAAATGTTTCTTTGGAGATA
CTTTCAGATCATTATACCCTCTTCCTATCAGAAATCCGAGGAGGAACTTT
GAAGGAACTTGAAAACAACCCCAAAGGGAAAACTGTTTGGGGGCGGTTTC
CGAGATTTATTATTTCTTTTAAAGCCCCCAATAACTTGCCGCGAAA

GGCGGGCCGCCTGGGTTCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXATTCATGGCCCTTACTTAAAATTTTTATTNGAAATCNTGTNG
GATTGATATTTCATTCTGAAAGTGAACCAAGGGTGAAAATGAACTCAACG
TGAGGGTGTGAGTGGGGAAAGAATAAAAACTCCTAAAATGTGGTAAAAAA
AAAGGATACCTGGAAGGGTGAGGGTGGTGAAGGAAATTATTTTGATTTGT
ANAATNTCTAAAGTGGACTGAAAAGGAAATTAAATANNAAGAAGGGGGGT
AAAAAAAATTCTTNTTAAGAAANTATAAANTACGAGCGGGGTGGTGAGAG
GGGGGACAATTTTAAAAAAAACCNCCCCCCAAAAAAATAAAAAATAATAA
AACNGGGTGGGTTTCCCCCTCCGCAAAAAAAAAAAAAAAGGGGGCCAAAA
AAAAAAAGAAAAAAAATCNNCNNNNCCCCCCCCTTTCCAAAAAAAATAGT
GTTATATTTTGGGGGGGGGGATATATATTATGTGCTAAAATAAAACTTTT
CACCTTTCCACATATTAAAATTCCCCCTTTTCTAACTAATAAACTTACTC
TCACTACATTCTTCTAACCAATTTTTCCTACATCAATACATATCTACATA
ATACATCATTTCCTTTCTTCCCCCCCATTACTCTTTACTTCTCCTTCACC
TCTTTCACTCATTTTATTTTATTCATTTTTCACTTTTCACCTTATTTCCT
TTTTATATTTTCCCTACACTTAATTATCCTACACTATTCCTTTCTTCATT
CATTTCATTATCATTTTCCCCTTACTATATGGTGTTTGTTGTGTGGGGGG

Query= MSMg01no415_p19.b1 MSMg01no415_p19.b1 CHROMAT_FILE:
MSMg01no415_p19.b1 PHD_FILE: MSMg01no415_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:31 2005
         (503 letters)



>mm_chr13_27118074_27118976
          Length = 903

 Score =  880 bits (455), Expect = 0.0
 Identities = 490/509 (96%), Gaps = 12/509 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaaggcctacctgagctgcatgagg------------aaagatcaaagatagaac 52
           ||||||||||||||| ||||||||||||||            |||||||||| |||||||
Sbjct: 743 gaattcaaggcctacttgagctgcatgaggaaagcttcttctaaagatcaaatatagaac 684

                                                                       
Query: 53  tagctgtagctgctcacagactggtacatgactaatactgtaaaaccctatggcattttg 112
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tagctgtagctgctcacagactggtacatgactaatactgtaaaaccctatggcattttg 624

                                                                       
Query: 113 aatatagttactaggaggagggaactctaagcttctagtggttacattttcagccatgtg 172
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 623 aatatagttactaggaggagggaactccaagcttctagtggttacattttcagccacgtg 564

                                                                       
Query: 173 tgtacagcatgactgaaaagaaagtcaacatggacagaagatatatttctgatcacaaat 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 563 tgtacagcatgactgaaaagaaagtcaacatggacagaagatatatttctgattacaaat 504

                                                                       
Query: 233 attgagctcctgtacctacaaaagttcaaagttgactcccatgaacatctcaaaggtttc 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attgagctcctgtacctacaaaagttcaaagttgactcccatgaacatctcaaaggtttc 444

                                                                       
Query: 293 cttgaagatctgcaactaatatcttcatcgtctcatccgtttacttaataccagaaggct 352
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 443 cttgaagatctgcaactaatatcttcatcatctcatccgtttacttaataccagaaggct 384

                                                                       
Query: 353 ttgctttgccagcaactaggaattctactgtattttaattcctttttcactgacagcata 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttgctttgccagcaactaggaattctactgtattttaattcctttttcactgacagcata 324

                                                                       
Query: 413 gggagcagttggcccttgtccatgacaccaaaccctcaatttataaaaccagattatatg 472
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 323 gggagcagttggcccttgtccatgacaccaaaccctcaatttataaaactagattatatg 264

                                        
Query: 473 gtttaagaatctgatcttgactactttct 501
           |||||||||||||||||||||||||||||
Sbjct: 263 gtttaagaatctgatcttgactactttct 235


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)