Query= MSMg01no418_a23.b1 MSMg01no418_a23.b1 CHROMAT_FILE:
MSMg01no418_a23.b1 PHD_FILE: MSMg01no418_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:09 2005
(482 letters)
>mm_chr13_34245224_34246104
Length = 881
Score = 745 bits (385), Expect = 0.0
Identities = 442/463 (95%), Gaps = 8/463 (1%)
Strand = Plus / Minus
Query: 6 gaattcaatccagttttcccaaga--aaaaaaaaaatctgattaactgagagtcactgca 63
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 458 gaattcaatccagtt---ccaagaagaaaaaaaaaatctgattaactgagagtcactgca 402
Query: 64 tctaccagccaaggcctctccagactttcattgaggagtggtggtggtggcctggggcca 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 401 tctaccagccaaggcctctccagactttcattgaggagcggtggtggtggcctggggcca 342
Query: 124 gagttctgttcacccccagggagctatcaacctattttaggtcttgttctaaatcttaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gagttctgttcacccccagggagctatcaacctattttaggtcttgttctaaatcttaag 282
Query: 184 agcatgcagtaacctcttcctatctgcaaatccacaaagccagctgcagcaaaccctaga 243
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agcatgctgtaacctcttcctatctgcaaatccacaaagccagctgcagcaaaccctaga 222
Query: 244 aagcgtccttctggctctgctactgtaaatgataggaccatgctccagtctcagagtaac 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aagtgtccttctggctctgctactgtaaatgataggaccatgctccagtctcagagtaac 162
Query: 304 ccc-tcccattcaggcagacgccccatttcctctcacctcaagaatatgacaagggcaga 362
||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ccctttccattcaggcagatgccccatttcctctcacctcaagaatatgacaagggcaga 102
Query: 363 caaggggaacactcagacatctttttcctcttaagaaaaaaaaaaaaaagccgggcagtg 422
|||||| ||||||||||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct: 101 caagggtaacactcagacttttttttcctcttaaggaaaaaaaaaaaaagccgggcagtg 42
Query: 423 gtggtgcatgcctttaatccccagcacttgggaggcagaggca 465
|||| || |||||||| || |||||||||||||||||||||
Sbjct: 41 gtgg-ccacacctttaat-cctagcacttgggaggcagaggca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 881
Length adjustment: 10
Effective length of query: 472
Effective length of database: 871
Effective search space: 411112
Effective search space used: 411112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_a23.g1 MSMg01no418_a23.g1 CHROMAT_FILE:
MSMg01no418_a23.g1 PHD_FILE: MSMg01no418_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:09 2005
(399 letters)
>mm_chr13_34033875_34034673
Length = 799
Score = 772 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 1 tcagagtaatgtactatcccgcctcaccccatacttcatttgctatgctccagggatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagagtaatgtactatcccgcctcaccccatacttcatttgctatgctccagggatttt 260
Query: 61 ttactctacccacatcgagcaccacttttagatcctttctcccctctcttcctgagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttactctacccacatcgagcaccacttttagatcctttctcccctctcttcctgagagac 320
Query: 121 aggagggagtgggtgctggaaatctccccactctatcgccaaagatcggacccagagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagggagtgggtgctggaaatctccccactctatcgccaaagatcggacccagagctg 380
Query: 181 ctgtatattaagcctacactccctcccccatgcagctccccctgctggcaatttcttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtatattaagcctacactccctcccccatgcagctccccctgctggcaatttcttaca 440
Query: 241 aagcctggcaaaccagtttctagagcctggtgaagaatataaaggttactgtttgccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcctggcaaaccagtttctagagcctggtgaagaatataaaggttactgtttgccatc 500
Query: 301 cctcacaggtcttctgtattttctcctctttgccctcttctcttcctcatttaatgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctcacaggtcttctgtattttctcctctttgccctcttctcttcctcatttaatgaaga 560
Query: 361 aatagctgtgcttatctttggtagacagcctcagccctg 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatagctgtgcttatctttggtagacagcctcagccctg 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
