TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGATGCACTACCGAATGGCTGAGAAGCACCTGAAAAAATGT
TCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGGTTAAGATCAAAATTCAGGTGACAGCAG
ATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGG
ATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AAATTGGACATAGTACTACCAGAGGATCCTGCAATACCCCTCCTGGGCAT
ATATCCAGGAGAAGTTCCAACTGGTAATAAGGACACATGCTCCACTATGC
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAAGTCAGATGC
TCCTCAACAGAGGAATGGATACAGAAGATGTGGTACATTTACACAATGGA
GTACTACTCAGCTATTAAAAAGGCTGAATTTATGAAATTCCTAGGCAAAT
GGATGGACCTGGAGGGTATCATCCTCAGAGAGGTAAACCAATCACAAAAG
AACTCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTT
CTAATACCCAATATACACTTTGCAAAACACATGAAACTCCCGAAGAATGA
AGACTAAAGTGCGTTCACTTTGCCCCCCTCTTTAAAATGAGAACAAAACC
CCCCTTAAAAGGTTTACAAACAAAAATTTG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGTGTTAATTGACTGCTTCGGGAAGAG
AGATATAATGACTCCTTATTAATCATCAAAAGAGATGTACAGCACGGAGG
CCCCACAATAATTGCTCCAACAGTGGAGAAATGTTAATTAATGAAAAAGA
ACAATGATGTAAGAAATTAGCTACATAATGCTTGCCTCCAGTAGTGGTTG
CATTCGAAACACAGTAGGGTGGAAACCACATTAGGTAGTAGATACACAGA
ACTTTCTACCTTAAATTTAGGTCGGAGGGCCAAAAAAAAAATTATCAGAG
TACTTTCTCTGCTTGAAGAAGTAAGAACATTCACCCAGAGCTATATTTAT
TTCAAAGAAAGAGCCCTTGTCAATCATCTCTGAGCTAGGCTTTTTTAAAA
TACAAAAATAAAACCATCCCCAGACCAAAACAGGTCATTTATTAATGCCC
TTTAATTTCAATACAGTAGGTCATTCTGAGTACTAAGGACAAAGAGGATG
GAAGACAGTGCTCTTCTCCAAATGGGAATCAGCAAATTCCATTGCTGGAC
CTTTCCCAGATGGAATATGAGGAGAAGAAAAAACACCTTCAGATTCACTT
CTTTTAAAGAGTGTGATTTTAAGTCTCTTGGAGAATANACTTCCTGTCTC
TCTAAAACTCCGGTTTCCAGAAAAGGAGTTGAGCTTAATGGACACACAGA
CGCTATCAGAGTTCAGC

Query= MSMg01no418_n20.g1 MSMg01no418_n20.g1 CHROMAT_FILE:
MSMg01no418_n20.g1 PHD_FILE: MSMg01no418_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:11 2005
         (562 letters)



>mm_chr13_8729435_8730400
          Length = 966

 Score = 1052 bits (544), Expect = 0.0
 Identities = 559/566 (98%), Gaps = 4/566 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgttaattgactgcttcgggaagagagatataatgactccttattaatcatcaaaaga 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgttaattgactgcttcgggaaaagagatataatgactccttattaatcatcaaaaga 260

                                                                       
Query: 61  gatgtacagcacggaggccccacaataattgctccaacagtggagaaatgttaattaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgtacagcacggaggccccacaataattgctccaacagtggagaaatgttaattaatg 320

                                                                       
Query: 121 aaaaagaacaatgatgtaagaaattagctacataatgcttgcctccagtagtggttgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagaacaatgatgtaagaaattagctacataatgcttgcctccagtagtggttgcat 380

                                                                       
Query: 181 tcgaaacacagtagggtggaaaccacattaggtagtagatacacagaactttctacctta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgaaacacagtagggtggaaaccacattaggtagtagatacacagaactttctacctta 440

                                                                       
Query: 241 aatttaggtcggagggccaaaaaaaaaa----ttatcagagtactttctctgcttgaaga 296
           ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||
Sbjct: 441 aatttaggtcggagggccaaaaaaaaaaaaaattatcagagtactttctctgcttgaaga 500

                                                                       
Query: 297 agtaagaacattcacccagagctatatttatttcaaagaaagagcccttgtcaatcatct 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtaagaacattcacccagagctatatttatttcaaagaaagagcccttgtcaatcatct 560

                                                                       
Query: 357 ctgagctaggcttttttaaaatacaaaaataaaaccatccccagaccaaaacaggtcatt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgagctaggcttttttaaaatacaaaaataaaaccatccccagaccaaaacaggtcatt 620

                                                                       
Query: 417 tattaatgccctttaatttcaatacagtaggtcattctgagtactaaggacaaagaggat 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 tattaatgccctttaatttcaatacagtaggtcattctgagtactaaggacaaaggggat 680

                                                                       
Query: 477 ggaagacagtgctcttctccaaatgggaatcagcaaattccattgctggacctttcccag 536
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 681 ggaagacagtgctcttctccaaatgggaatcagcaaattccgttgctggacctttcccag 740

                                     
Query: 537 atggaatatgaggagaagaaaaaaca 562
           ||||||||||||||||||||||||||
Sbjct: 741 atggaatatgaggagaagaaaaaaca 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 966
Length adjustment: 10
Effective length of query: 552
Effective length of database: 956
Effective search space:   527712
Effective search space used:   527712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)