MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-419C02
Chromosome	13 (Build37)
Map Location	73,214,779 - 73,214,907
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042828, LOC100042832, LOC100042836, Irx2
Downstream gene	LOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36, Aytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1540 ESTs, 10 Proteins

name	LOC100042836 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042836
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Irx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16372 MGI:1197526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC621486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Irx4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50916 MGI:1355275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 493 ESTs, 2 Proteins

name	Ndufs6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:407785 MGI:107932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl36 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94066 MGI:2137228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aytl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210992 MGI:2384812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13162 MGI:94862
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clptm1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218335 MGI:2442892
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tert (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21752 MGI:1202709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22598 MGI:1336892
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74338 MGI:1921588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc12a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20499 MGI:1342283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72293 MGI:1919543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666360 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666360 MGI:3643433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins

name	Trip13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69716 MGI:1916966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105246 MGI:2145317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71164 MGI:1918414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042909 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 152 ESTs, 4 Proteins

name	2900041A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72948 MGI:1920198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC621824 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 72 ESTs, 2 Proteins pseudo : _no_value

name	Cep72 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74470 MGI:1921720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042832 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264374 GeneID:100042832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1538 ESTs, 10 Proteins product : similar to 60S ribosomal protein L9, transcript variant 2 transcript_id : XM_001478982.1

name	LOC100042832 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264372 GeneID:100042832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1539 ESTs, 10 Proteins product : similar to 60S ribosomal protein L9, transcript variant 1 transcript_id : XM_001478975.1

name	Irx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059033 GeneID:16372 MGI:1197526
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 2 (Drosophila) transcript_id : NM_010574.2

name	Irx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9256546 GeneID:50916 MGI:1355275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 4 (Drosophila) transcript_id : NM_018885.1

name	LOC100042864 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264380 GeneID:100042864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 493 ESTs, 2 Proteins product : similar to ribosomal protein S28 transcript_id : XM_001479012.1

name	Ndufs6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56711243 GeneID:407785 MGI:107932
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) Fe-S protein 6 transcript_id : NM_010888.1

name	Mrpl36 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716450 GeneID:94066 MGI:2137228
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L36 transcript_id : NM_053163.1

name	Aytl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350445 GeneID:210992 MGI:2384812
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyltransferase like 2 transcript_id : NM_145376.4

name	Slc6a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129796 GeneID:13162 MGI:94862
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 transcript_id : NM_010020.3

name	Clptm1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122536 GeneID:218335 MGI:2442892
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CLPTM1-like transcript_id : NM_146047.1

name	Tert (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678290 GeneID:21752 MGI:1202709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : telomerase reverse transcriptase transcript_id : NM_009354.1

name	Slc6a18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:101943562 GeneID:22598 MGI:1336892
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter), member 18 transcript_id : NM_001040692.1

name	Slc6a19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801994 GeneID:74338 MGI:1921588
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter), member 19 transcript_id : NM_028878.2

name	Slc12a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130177 GeneID:20499 MGI:1342283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 12, member 7 transcript_id : NM_011390.2

name	Nkd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802218 GeneID:72293 MGI:1919543
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : naked cuticle 2 homolog (Drosophila) transcript_id : NM_028186.3

name	EG666360 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264385 GeneID:666360 MGI:3643433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins product : predicted gene, EG666360 transcript_id : XM_988535.2

name	Trip13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350962 GeneID:69716 MGI:1916966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor interactor 13 transcript_id : NM_027182.2

name	Brd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112817627 GeneID:105246 MGI:2145317
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain containing 9 transcript_id : NM_001024508.2

name	Zdhhc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113931664 GeneID:71164 MGI:1918414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 11 transcript_id : NM_027704.2

name	LOC100042909 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264387 GeneID:100042909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 152 ESTs, 4 Proteins product : similar to 40S ribosomal protein S29 transcript_id : XM_001479125.1

name	2900041A09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469050 GeneID:72948 MGI:1920198
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900041A09 gene transcript_id : NM_182839.1

name	Cep72 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802391 GeneID:74470 MGI:1921720
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 72 transcript_id : NM_028959.2

name	LOC100042832 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264373 GeneID:100042832
definition	codon_start : 1 product : similar to 60S ribosomal protein L9 isoform 1 protein_id : XP_001479025.1

name	LOC100042832 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264375 GeneID:100042832
definition	codon_start : 1 product : similar to 60S ribosomal protein L9 isoform 2 protein_id : XP_001479032.1

name	Irx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559370 CCDS:CCDS26628.1 GeneID:16372 MGI:1197526
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 2 protein_id : NP_034704.1

name	Irx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256547 CCDS:CCDS26629.1 GeneID:50916 MGI:1355275
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 4 protein_id : NP_061373.1

name	LOC100042864 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264381 GeneID:100042864
definition	codon_start : 1 product : similar to ribosomal protein S28 protein_id : XP_001479062.1

name	Ndufs6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56711244 CCDS:CCDS26630.1 GeneID:407785 MGI:107932
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : NADH dehydrogenase Fe-S protein 6 product : NADH dehydrogenase (ubiquinone) Fe-S protein 6 protein_id : NP_035018.1

name	Mrpl36 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716451 CCDS:CCDS26631.1 GeneID:94066 MGI:2137228
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence TAS] codon_start : 1 product : mitochondrial ribosomal protein L36 protein_id : NP_444393.1

name	Aytl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542186 GeneID:210992 MGI:2384812
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047184 - 1-acylglycerophosphocholine O-acyltransferase activity [Evidence IEA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : acyltransferase like 2 protein_id : NP_663351.2

name	Slc6a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753606 CCDS:CCDS26632.1 GeneID:13162 MGI:94862
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005329 - dopamine transporter activity [Evidence IMP]; GO:0008504 - monoamine transporter activity [Evidence ISS]; GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0042416 - dopamine biosynthesis [Evidence IMP]; GO:0042420 - dopamine catabolism [Evidence IMP]; GO:0015872 - dopamine transport [Evidence IMP]; GO:0015844 - monoamine transport [Evidence ISS]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0042053 - regulation of dopamine metabolism [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : dopamine transporter 1 product : solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 protein_id : NP_034150.1

name	Clptm1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122537 GeneID:218335 MGI:2442892
definition	codon_start : 1 product : cisplatin resistance related protein CRR9p protein_id : NP_666159.1

name	Tert (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678291 CCDS:CCDS26633.1 GeneID:21752 MGI:1202709
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]; GO:0003720 - telomerase activity [Evidence IDA]; GO:0003721 - telomeric template RNA reverse transcriptase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006278 - RNA-dependent DNA replication [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA] codon_start : 1 note : telomerase catalytic subunit product : telomerase reverse transcriptase protein_id : NP_033380.1

name	Slc6a18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:101943563 GeneID:22598 MGI:1336892
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence TAS] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence TAS] codon_start : 1 note : X transporter protein 2 product : solute carrier family 6 (neurotransmitter transporter), member 18 protein_id : NP_001035782.1

name	Slc6a19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037367 CCDS:CCDS26634.1 GeneID:74338 MGI:1921588
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0015171 - amino acid transporter activity [Evidence IEA]; GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015175 - neutral amino acid transporter activity [Evidence IDA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0015804 - neutral amino acid transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 6, member 19 protein_id : NP_083154.1

name	Slc12a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755534 CCDS:CCDS26635.1 GeneID:20499 MGI:1342283
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0015377 - cation:chloride symporter activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006821 - chloride transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0007605 - sensory perception of sound [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 12, member 7 protein_id : NP_035520.1

name	Nkd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980740 CCDS:CCDS26636.1 GeneID:72293 MGI:1919543
definition	codon_start : 1 exception : mismatches in translation note : naked cuticle 1 homolog product : naked cuticle-2 protein_id : NP_082462.2

name	EG666360 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264386 GeneID:666360 MGI:3643433
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_993629.2

name	Trip13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625724 CCDS:CCDS26637.1 GeneID:69716 MGI:1916966
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : thyroid hormone receptor interactor 13 protein_id : NP_081458.1

name	Brd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112817628 GeneID:105246 MGI:2145317
definition	codon_start : 1 product : bromodomain containing 9 protein_id : NP_001019679.2

name	Zdhhc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625849 GeneID:71164 MGI:1918414
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : zinc finger, DHHC domain containing 20; DHHC-containing protein 10 product : zinc finger, DHHC domain containing 11 protein_id : NP_081980.1

name	LOC100042909 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264388 GeneID:100042909
definition	codon_start : 1 product : similar to 40S ribosomal protein S29 protein_id : XP_001479175.1

name	2900041A09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469051 CCDS:CCDS26638.1 GeneID:72948 MGI:1920198
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : tubulin polymerization promoting protein; brain-specific protein p25 alpha product : tubulin polymerization-promoting protein protein_id : NP_878259.1

name	Cep72 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62177169 CCDS:CCDS26639.1 GeneID:74470 MGI:1921720
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : centrosomal protein 72 kDa protein_id : NP_083235.2

name	LOC100042828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042828
definition	number : 1 pseudo : _no_value

name	LOC100042836 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042836
definition	number : 1 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 1 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 2 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 3 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 4 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 5 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 6 pseudo : _no_value

name	LOC621486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621486
definition	number : 7 pseudo : _no_value

name	LOC621824 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264341 GeneID:621824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 72 ESTs, 2 Proteins product : similar to integrin-linked kinase ILK pseudo : _no_value transcript_id : XR_033664.1

clone name	MSMg01-455I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506H08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-406P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-419C02.T7 (MSMg01no419_c02.b1)	MSMg01-419C02.TJ (MSMg01no419_c02.g1)
ACC	AG514304	AG514305
length	940	755
length of high quality (start - end)	---	129 (188 - 316)
definition	CHROMAT_FILE: MSMg01no419_c02.b1 PHD_FILE: MSMg01no419_c02.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:38:32 2005	CHROMAT_FILE: MSMg01no419_c02.g1 PHD_FILE: MSMg01no419_c02.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:38:32 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CGGCCTCTTACATTAACCTATTTTCGCCCGCCCCGCTCGCGCGCTTCCTC TTCTCTTACCCGGGGGGCCGTGCGGTGGGGTGGTGTTTTTCCCGACAGAC GGGGTTTATCGCCCCTCACCCCCCCCCCCCTTTTCCCTTTCGCTCCCGTT TTTCCCCACCCCGCATTTTTTCCCGTTCTCTACTTTTTTCGGGCGCTGGC ACACCGCTCTCCCTCTCTCAAAAAATAAAAAAAAAAAAAATTTTTGGTGG CGCGCGCGGGGGGCGCCCCCCCCGGGGGGGCCCCCCCTCTTTTAAGAAGT TATAGAGGGGGGGTAAAAAGTTTCCCCACCCCTTTATTTTTTTTCGTGCT TCCCCCCCAAAGAGAAAAAAAAGAGGGGGGGGGAGAGTCCCCCCCCGGGG NNCGGGNNNNNNGGGGGGGAAAATTTTTCCCTTTTCCAGGGGGTTTTTGG TTTCACCCCCCNCCCCGCNNNNNNNCGAAAAGGAAAAATTTTTTAACCAA AAAGGGCGTTAAAAATTTTCTTTTAAACAACCCCACATTGGGTGGGTTAT TATAAAAAGGGGGTGTTTTCTTTTTTAACACCCCCCCTTTCAAAAAATTT TCCCCNCCCCTCCGTGGGGGGGGAAAAAAGAATTTTTTTCTTTTAGGGAA AAAAGAACACCCCCCCCTNNNCCCCCTTTAAAGAAGGCAAAAAAAATATT TCTCTTTTTTAAAAAAAAAAAGGGGGGGGGGNTGGTGGGGTGGGTACGCT GTTTTTCCCCTTCCCAATACACCTATTCTTTTTATCCCACTTTTTGCCCC CGCTCTCCCTCCTCTTTTTATTNTCCCCTTTTTTTATATATTTATCTTTC GCGGGCGCGGCTGGTTGTTGCCTGTCCCTCCTATTTTCCCCCCCCACCAT CTTTTATTACCTGCTCCTCTTGATTTTCCTTGCGCCCTGG	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXTTCAGAAATTCAGATTCAGAAAACGCAGGAAAAAACCCACAC AGTAGCACAGAGCTCTATTCTGAAACTAGAGACATCAATTTGAAGAGGAG TGAGGATGGCGATGGATTAAAAGTTGAGGATGTGCCCCAGACTGACCTCT GACTCATGCTCAGAGGGACTTTCCTGACTGTCTGCTAGCTGCTCTCTCCC TGTTTCCTCAGGCTGTTTATGGCTCATCTGTTTTCTGGTTATTATAACCT CTTGACCTCTCATCCTATGATAGTATCCTTGNAGATTTCAGGGNCAACTC ACAGTGGTACGGCTCTCACCATGTGGTAACTACAAGCCTGGTTCATGTAG ACATCTTGACTCCTTCCCGTCTCTAGTTCTGTGCCTGCTATTTTGGTGAC CGCACTGATTACTGGCTTTACCAAGGTTCTAGATTCTTGCCCCTAGGTGG TATCAACTACCATTGTCTTTCATGACTGCTTATGTCTGATGACTTGCTTG CTCCTGTGTGAGCCTTTTAACCCACTTCACGCCCTTTCCCTGTTGTCGTT TCCCCGTTTACCGCCTCTCGTCCCTGTTATACTTGCTCTCTTCATCTTTC CCTCCCTACCTCTGTTCTTCTTTTTCTCCCCCCCCTACCCTACTCCTCCC TCTCTACCGCTTTTATTCCACTTCCTGTTTCTCCCGCTTTTTCTCTCTCG AATAG
quality values	Open. Hide. 6 6 8 8 8 8 10 10 6 6 6 6 6 6 8 8 8 10 10 8 8 10 11 9 10 11 11 8 8 8 8 8 8 13 15 10 8 6 6 6 6 8 6 7 8 8 10 13 9 9 9 9 9 9 9 9 8 8 8 8 11 11 13 15 10 10 9 9 8 8 6 6 8 10 8 9 8 8 8 8 8 8 8 8 8 9 13 11 9 9 7 11 6 6 6 6 8 8 8 8 8 12 9 9 9 9 9 9 9 12 12 12 12 17 10 9 9 11 11 12 19 14 13 12 12 13 12 9 9 8 12 9 9 9 10 19 10 10 9 8 8 8 8 11 12 8 7 7 8 13 13 9 9 9 9 8 8 8 8 12 8 8 6 8 6 9 10 13 15 10 10 10 7 15 9 9 10 10 8 8 8 8 6 6 10 13 14 8 8 11 8 8 8 8 8 10 8 10 10 10 10 10 8 8 7 6 6 6 6 6 8 8 9 9 6 8 8 10 6 6 8 8 9 9 9 9 9 10 10 10 15 21 20 19 23 18 10 6 8 6 6 10 6 8 8 8 7 9 7 6 6 6 7 7 7 6 8 10 15 23 23 23 9 9 9 10 10 10 10 11 11 11 10 11 16 17 22 15 17 11 13 11 11 17 19 15 15 9 7 10 7 10 10 10 18 11 6 6 6 10 6 8 8 7 8 8 11 10 11 12 12 15 9 9 9 9 12 9 9 9 6 7 7 9 9 9 11 12 10 8 13 13 13 13 9 9 11 11 20 9 9 9 9 7 6 6 6 6 9 10 11 10 9 9 10 12 10 13 13 10 11 11 11 11 11 17 17 10 10 8 8 8 8 8 8 8 8 15 18 18 15 21 9 7 7 10 8 8 8 9 9 9 11 10 8 12 11 14 12 3 0 0 3 10 12 3 0 0 0 0 0 0 3 14 15 18 15 10 10 9 15 18 9 9 11 9 8 8 8 8 8 12 10 8 8 8 9 9 10 11 11 12 12 12 16 8 8 8 8 6 8 11 6 6 6 6 7 7 9 14 3 0 3 8 13 10 8 3 0 0 0 0 0 0 0 3 7 8 8 9 10 10 10 10 12 10 10 9 9 9 11 11 11 22 22 16 21 14 14 9 12 9 10 10 8 6 6 6 8 8 8 9 14 14 9 9 8 8 6 6 6 15 11 11 8 8 6 6 6 8 9 8 8 8 7 7 7 8 8 8 9 7 7 6 7 6 6 6 6 8 6 6 6 8 8 8 9 8 8 10 14 14 8 8 8 10 8 8 8 8 8 9 14 8 8 6 6 6 6 6 6 17 18 18 13 11 11 9 8 8 9 9 9 14 17 11 11 11 12 10 10 10 12 12 3 0 3 15 15 6 6 6 8 8 8 9 9 9 17 18 16 14 17 14 12 14 12 9 8 7 7 8 13 18 26 19 12 12 9 11 11 11 8 8 9 9 9 8 10 10 13 8 8 8 8 6 7 7 9 9 9 13 12 12 10 10 10 3 0 0 0 3 14 14 15 12 10 9 10 10 8 8 8 8 8 8 8 6 6 11 7 11 12 10 13 8 8 8 8 11 8 8 8 8 11 12 12 12 9 10 9 11 11 21 25 10 9 9 9 9 7 8 8 10 14 13 17 12 12 9 3 0 3 9 9 9 9 8 10 8 8 8 8 8 6 6 6 6 8 6 8 10 10 8 9 9 9 10 10 8 8 8 8 8 8 10 10 8 8 8 10 8 8 8 9 9 9 13 17 19 10 9 8 8 8 8 9 9 10 9 9 12 8 8 8 8 8 11 12 23 11 8 8 8 8 8 8 8 8 10 9 9 9 9 9 12 10 8 6 6 6 3 0 3 17 18 30 18 23 23 34 23 23 14 11 9 9 9 9 9 8 8 8 10 8 10 10 15 14 6 6 8 8 8 8 8 8 8 9 6 6 6 8 8 8 8 8 10 10 10 6 6 6 6 6 8 10 12 8 8 8 6 7 8 12 13 10 10 9 9 13 14 16 12 10 6 8 8 8 10 10 8 9 9 10 8 8 8 8 9 9 10 11 10 13 10 10 10 9 9 8 8 6 6 10 8 8 8 8 6 8 8 8 8 8 8 6 6 6 6	Open. Hide. 11 11 23 17 16 16 18 25 23 22 39 39 39 44 44 44 44 44 41 41 44 59 33 27 8 3 0 3 6 6 9 7 9 10 9 16 13 25 19 23 34 34 41 41 47 47 41 41 50 50 42 47 27 27 8 6 6 6 6 6 9 9 9 10 10 20 20 26 14 14 14 15 19 15 9 9 9 9 12 9 10 10 10 10 10 13 16 12 12 22 34 30 27 27 27 13 10 10 19 10 10 13 18 15 12 12 12 15 17 19 25 41 32 42 39 43 43 30 27 17 15 15 12 12 26 15 31 28 36 36 36 36 23 23 20 18 15 12 12 18 19 20 19 15 18 18 19 19 15 18 15 19 16 11 11 19 12 9 9 10 10 9 14 9 9 13 15 10 11 11 15 12 13 13 24 24 17 16 15 26 19 14 14 16 16 16 27 27 18 19 23 44 44 57 57 57 57 57 59 57 68 68 68 68 68 57 57 57 57 57 57 52 57 57 59 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 59 59 57 57 59 59 59 59 68 59 59 44 33 24 24 13 13 14 21 32 34 42 47 47 57 57 57 59 57 57 54 57 54 57 57 57 59 57 57 57 57 57 57 59 48 48 48 59 59 59 47 47 43 43 47 57 57 57 57 57 57 57 57 59 59 59 59 57 57 48 50 48 50 50 50 30 27 12 12 15 9 9 9 9 9 9 9 9 9 9 9 20 18 23 27 3 0 3 27 27 59 59 59 59 37 23 20 3 0 3 27 27 41 41 41 41 41 30 28 11 8 8 8 8 8 8 12 18 22 15 15 11 11 11 19 19 28 30 23 30 18 18 18 30 30 37 48 28 28 13 21 21 37 37 43 43 43 43 48 48 48 40 41 28 28 40 40 57 59 59 59 54 54 54 59 44 41 20 20 20 20 34 34 41 20 20 28 23 20 20 20 32 20 24 24 28 18 18 18 25 29 31 31 28 23 23 32 28 39 28 28 22 16 12 10 8 10 8 10 12 16 13 15 15 14 14 19 19 10 10 10 19 19 34 28 28 14 14 14 18 23 18 19 19 21 14 14 14 21 23 22 19 28 21 24 21 18 19 19 12 8 8 8 8 8 8 10 10 10 13 16 23 21 25 12 11 11 11 13 11 11 8 8 8 10 8 9 9 10 15 17 15 19 11 11 11 11 11 11 11 20 11 9 9 9 13 13 13 10 10 10 16 16 15 17 12 17 14 8 10 8 8 8 8 6 8 8 8 9 19 19 19 18 14 13 13 11 10 10 17 18 12 8 8 8 6 6 8 8 8 8 8 8 8 12 10 10 10 8 8 8 6 6 8 8 9 9 12 10 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 9 9 11 9 8 6 6 6 8 8 8 7 7 8 8 8 8 8 10 10 8 11 9 10 9 9 10 10 18 20 12 13 13 21 21 12 12 13 11 9 9 8 8 6 6 6 8 8 8 9 9 12 19 10 8 8 9 8 10 15 15 11 11 8 8 8 8 8 8 11 9 8 8 8 10 10 10 10 10 10 19 8 6 8 10 6 6 6 8 8 8 8 13 13 6 6 8 8 8 8 8 8 8 6 6 6 8 9 7 8 8 8 9 9 13 10 12 12 13 13 11 10 8 8 8 8 8 10 10 9 9 7 8 8 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no419_c02.g1 MSMg01no419_c02.g1 CHROMAT_FILE:
MSMg01no419_c02.g1 PHD_FILE: MSMg01no419_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:32 2005
         (129 letters)



>mm_chr13_73214579_73215107
          Length = 529

 Score =  242 bits (125), Expect = 7e-69
 Identities = 128/129 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagactgacctctgactcatgctcagagggactttcctgactgtctgctagctgctctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cagactgacctctgactcatgctcagagggactttcctgactgtctgctagctgctctct 270

                                                                       
Query: 61  ccctgtttcctcaggctgtttatggctcatctgttttctggttattataacctcttgacc 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ccctgcttcctcaggctgtttatggctcatctgttttctggttattataacctcttgacc 210

                    
Query: 121 tctcatcct 129
           |||||||||
Sbjct: 209 tctcatcct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space:    63041
Effective search space used:    63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information