Query= MSMg01no420_h03.b1 MSMg01no420_h03.b1 CHROMAT_FILE:
MSMg01no420_h03.b1 PHD_FILE: MSMg01no420_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:17 2005
(344 letters)
>mm_chr13_9713536_9714279
Length = 744
Score = 619 bits (320), Expect = 0.0
Identities = 338/344 (98%)
Strand = Plus / Minus
Query: 1 atatttgtcttaacttggtggtttaaataccttaaacagaaatttccatgcatctttgtg 60
|||||||||||| |||| || |||||||||||||| |||||||||| |||||||||||||
Sbjct: 544 atatttgtcttagcttgttgttttaaataccttaagcagaaatttcaatgcatctttgtg 485
Query: 61 ctattgggattttaacatgggaaatattttattctccttatatatggaattaaatatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctattgggattttaacatgggaaatattttattctccttatatatggaattaaatatata 425
Query: 121 ttctttgaatatttatccctaacctcaaactcagatacaaagaaaagtaaacaatccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttctttgaatatttatccctaacctcaaactcagatacaaagaaaagtaaacaatccttt 365
Query: 181 atttactgagtatcaagtaaatgctgaagattactagttgattagaaactagttacacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atttactgagtatcaagtaaatgctgaagattactagttgattagaaactagttacacta 305
Query: 241 gagttctctgtgatgttaaaccacggtttactgagatgtgactctgttgagtctatttgc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 304 gagttctctgtgatgttaaaccacggtttactgagctgtgactctgttgagtctatttgc 245
Query: 301 tcaacagaattttgggtggttctatgcttctcaccatgtgatgt 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcaacagaattttgggtggttctatgcttctcaccatgtgatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no420_h03.g1 MSMg01no420_h03.g1 CHROMAT_FILE:
MSMg01no420_h03.g1 PHD_FILE: MSMg01no420_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:18 2005
(307 letters)
>mm_chr13_9556280_9556988
Length = 709
Score = 545 bits (282), Expect = e-159
Identities = 301/308 (97%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 1 tcagctgagaaatttagaacatctactaagaaaagttataaaggatttgatacttcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagctgagaaatttagaacatctactaagaaaagttataaaggatttgatacttcaagt 260
Query: 61 tgcagtagaaattggaaatatatgaaataggaatgccatgatcttaattcttgaaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagtagaaattggaaatatatgaaataggaatgccatgatcttaattcttgaaaatgt 320
Query: 121 tcaatgctacacagtgattccgttttcacttctccatcttcatccactttctcttctttt 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tcaatgctacacagtgattccgttttcacatctccatcttcatccactttctcttctttt 380
Query: 181 gttaggatacccaaagcacattttttta--aaccatataaatgtttctggttttcctttt 238
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 gttaggatacccaaagcacattttttttttaaccatataaatgtttctggttttcctttt 440
Query: 239 attttaatacatttaatatctgtcttagtcagggtttctattcttgcacaaacactatng 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 441 attttaaaacatttaatatctgtcttagtcagggtttctattcttgcacaaacaccat-g 499
Query: 299 accaagaa 306
||||||||
Sbjct: 500 accaagaa 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 709
Length adjustment: 9
Effective length of query: 298
Effective length of database: 700
Effective search space: 208600
Effective search space used: 208600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
