NTCTATAATTGCGGCCGCTATACGACTCCTATATCCAGAGATCCGCGGAA
TTCTCTAAAATTTCATTTATTTTATGTATGTGAGTACACTGTCACTGTCT
TCAGACACACCAGAAGATGGCGTCGGATACCAGATGGTTGTGAGCCACCA
TGTGGTTGCTGGAAATTAAACCCAGGATCTCTGGAAAAGCAGTCAGGTGC
TCTTAACTGCTGAGCACTCTTTCTAGCCCCAGAAAGAGAATTCCAAGAAT
CAGGCATCCTGCTTTTTTTGTAAACTCTTCTTCCCTTTGAAATAGAAGTT
GTGTGCCTTACAGGTTCTTATTTTTAATATCTTTTAAAAGGCCTGATTCA
TTATTTTGTTCCTTATTTTAGTTTATTTACTTCTTATACTTATACATTTG
TATTTCCTGCTTTTATTTTTAATTATGTACAGAACAATCGCTCATTTACA
TAGTGAATTAGATACATAATTCTCATTCGTCTCTTGAATCTGCCCCAATG
AAACTTTTCCCCATACATTCCCAGTACTACTACACACCTTTCCCTGCCTG
TGACCACATTTGCTTTGGTTGCTTGAATAACCATGGGTGGGGGCATATTT
CTGAGAGCATGAACTACATCTCATTGGCTACACCACTGAAGATGTGGCAG
CCTCTTCCTAAGCATCCATAAATTGACTATAGTGCCTCCTGAAGTGTTGG
AACTCTATGGGCCCTCCCCCATTCCCTGATGAAAGGTCACAGGCCTAACC
TTTAGTATGTCTTN

NCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAAGATACAAGTCATAAACCATAT
GAAACTCAAGAAGAAGGGAGACCACAGTGTGGATACTTCAATCCATCTTA
GAAGGGGGGAACAAAACACCCATGGAAGGAGACAAAGTGTGGGATAGAGA
TCAAAGAAATGACCATCCACAGACTGACTCACCTGGGGATCCATTTCATA
TGTAATCACCAAACCCAGACACTGTTGTGGATGTCAACAAGTGCTTGCTG
ACGGGAGCCTGATATAGCTCTCTCCTGATAGGCTCTGCCAGTGCCTGACA
AATACAGAAGTGGATGCTCACAGCCATCCATTGAACTGAACACAGGGTCC
CCAATGAAGGAGACAGAGAAAGGACCTAAGGAGCTGAAGGGGTTTGTAGC
CCCATAGGATGAACAACAATATAAACTAGTCAGTAACCCCAGAGCTCTCA
AGGACTAAACCACCAATCATGGTGGGACTCATGGCTCCAGGTGCATATGC
AATAGAGGATGACCTAGTTGGACATCAATTGGGGGGAGAGGCCCTTTATC
CTATGAAGGCTCTATGCCCCAGTGGGGGGGAAAGCACGTTCAGGATCATG
AGGTGGTGGTTTGTTATTCTTTAAACGGATTTAATCCTAAGTTCATCCTC
TACCCCTTTCCTTTATCTTTTTTTCCTTTAACTTTCACATATTATCTTTT
TTTCTTACATCTACTTCTTN

Query= MSMg01no421_n15.b1 MSMg01no421_n15.b1 CHROMAT_FILE:
MSMg01no421_n15.b1 PHD_FILE: MSMg01no421_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:10 2005
         (539 letters)



>mm_chr13_81609747_81610686
          Length = 940

 Score =  926 bits (479), Expect = 0.0
 Identities = 522/543 (96%), Gaps = 15/543 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctaaa--atttcatttattttatgtatgtgagtacactgtcactgtcttcaga 62
           ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 gaattctctaaaacattt-atttattttatgtatgtgagtacactgtcactgtcttcaga 865

                                                                       
Query: 63  cacaccagaagatggcgtcggataccagatggttgtgagccaccatgtggttgctggaaa 122
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 cacaccagaagatggcaccggataccagatggttgtgagccaccatgtggttgctggaaa 805

                                                                       
Query: 123 ttaaacccaggatctctggaaaagcagtcaggtgctcttaactgctgagcactctttcta 182
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 804 ttaaacccaggatctctggaaaagcagtc-ggtgctcttaactgctgagcactctttcta 746

                                                                       
Query: 183 gccccagaaagagaattccaagaatcaggcatcctgctttttttgtaaactcttcttccc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 745 gccccagaaagagaattccaagaatcaggcatcctgctttttttgtaaactcttcttcca 686

                                                                       
Query: 243 tttgaaatagaagttgtgtgccttacaggttctt------atttttaatatcttttaaaa 296
           ||||||||||||||||||||||||||||||||||      |     ||||||||||||||
Sbjct: 685 tttgaaatagaagttgtgtgccttacaggttcttaacaaaa-----aatatcttttaaaa 631

                                                                       
Query: 297 ggcctgattcattattttgttccttattttagtttatttacttcttatacttatacattt 356
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggcttaattcattattttgttccttattttagtttatttacttcttatacttatacattt 571

                                                                       
Query: 357 gtatttcctgcttttatttttaattatgtacagaacaatcgctcatttacatagtgaatt 416
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 570 gtatttcctgcttttatttttaattatgtacagaacaatccctcatttacatagtgaatt 511

                                                                       
Query: 417 agatacataattctcattcgtctcttgaatctgccccaatgaaacttttccccatacatt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agatacataattctcattcgtctcttgaatctgccccaatgaaacttttccccatacatt 451

                                                                       
Query: 477 cccagtactactacacacctttccctgcctgtgaccacatttgctttggttgcttgaata 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cccagtactactacacacctttccctgcctgtgaccacatttgctttggttgcttgaata 391

              
Query: 537 acc 539
           |||
Sbjct: 390 acc 388


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 940
Length adjustment: 10
Effective length of query: 529
Effective length of database: 930
Effective search space:   491970
Effective search space used:   491970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)