Query= MSMg01no423_k23.b1 MSMg01no423_k23.b1 CHROMAT_FILE:
MSMg01no423_k23.b1 PHD_FILE: MSMg01no423_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:25 2005
(416 letters)
>mm_chr13_60879320_60880135
Length = 816
Score = 743 bits (384), Expect = 0.0
Identities = 408/416 (98%)
Strand = Plus / Minus
Query: 1 ttctgagtttcatgaagccagggctacacaatgaaaactggtttcaaaacaaagacaaaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 676 ttctgagtttcatgaagccagggctacacaaggaaaactggtttcaaaacaaagacaaaa 617
Query: 61 atcctatctggaaagctcaaaaatgcattcttttccctggaagctgcttttgtatgtagt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 atcctacctggaaagctcaaaaatgcattcttttccctggaagctgcttttgtatgtagt 557
Query: 121 ccttgggatgcaacttattgggaccctacatcagacacagtctctgagagatggttgtcc 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 556 tcttgggatgcaacttattgggaccctacatcagacacagtctctgaaagatggttgtcc 497
Query: 181 tccttggtgcccgtggtatatgtgagggtggtcacatctgtggaaggtacagaatcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tccttggtgcccgtggtatatgtgagggtggtcacatctgtggaaggtacagaatcaggt 437
Query: 241 aagtgcagcatgttttagctttctgaagggatgaagtaactaaagcgaacctctcagtga 300
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 436 aagtgcagcatggggtagctttctgaagggatgaagtaactaaagtgaacctctcagtga 377
Query: 301 gcagaactcagccgagctggagggcatgactttcacccttcccttacatcaatccccaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gcagaactcagccgagctggagggcatgactttcacccttcccttacatcaatccccaat 317
Query: 361 ctgtctgtatcattttgctttgcaaaaaccatcatcaccatcattgacattatcat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctgtctgtatcattttgctttgcaaaaaccatcatcaccatcattgacattatcat 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_k23.g1 MSMg01no423_k23.g1 CHROMAT_FILE:
MSMg01no423_k23.g1 PHD_FILE: MSMg01no423_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:25 2005
(501 letters)
>mm_chr13_60722238_60723134
Length = 897
Score = 903 bits (467), Expect = 0.0
Identities = 491/501 (98%), Gaps = 4/501 (0%)
Strand = Plus / Plus
Query: 1 ttccctaggatcccctaaacacattggcttttctcagcatatgactcaaacaatacactt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ttccctaggatcccctaaacacattggcttttctcagcatatgactcaaataatacactt 260
Query: 61 aaattcccaatccttggaattttacaacttggccaatcctgtttttattgaagaagggaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 aaattcccaatccttggaattttacaacttggccaatcctgtttttattgaagaagggga 320
Query: 121 aggggattccttgttctgatgttcatgtgccacacacatctgcggcaggcacacctttct 180
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 agggggctccttgttctgatgttcatgtgccacacacatctgcggca----cacctttct 376
Query: 181 tcagcacagctggataccttcaggtttcagagaacgtggtggtaagcctgtagcccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcagcacagctggataccttcaggtttcagagaacgtggtggtaagcctgtagcccacag 436
Query: 241 ccgttagccagttccacagtcctgccaaaccacactacctttaatgatgttggaagcaga 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ccgttagccaggcccacagtcctgccaaaccacactacctttaatgatgttggaagcaga 496
Query: 301 ggtgtcaaaaaggaagatctgagggttgagttgatttcttcctggtaagttttaattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggtgtcaaaaaggaagatctgagggttgagttgatttcttcctggtaagttttaattgat 556
Query: 361 tctgggaaggtgtgtgcaggttctgaaagcacaggatgtaattgcggactgatggggctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctgggaaggtgtgtgcaggttctgaaagcacaggatgtaattgcggactgatggggctc 616
Query: 421 catgggagactccccaagatgtattcaggaagaagagcttcttagcaggatactgtgagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 catgggagactccccaagatgtattcaggaagaagagcttcttagcaggatactgtgagc 676
Query: 481 gagctgggaaagtctggtgct 501
|||||||||||||||||||||
Sbjct: 677 gagctgggaaagtctggtgct 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 897
Length adjustment: 10
Effective length of query: 491
Effective length of database: 887
Effective search space: 435517
Effective search space used: 435517
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
