TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATGGGTCNGTTTACTAAAAGGAAACCATTGCTGCTGGGAGCTTGGA
GAATTGTTATGGTCCAGAATTGTTAAGCTTAGGGGGGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAGAAATCGGCATAAGG
AGATGTGGCCTGTTCTGGGTAGGATGTTCTCAAAATAACCAGAAAGCCCC
AGTGAAGGCGTTAAGCTTGAGTGTTCTGTAAGATGACTAAAAGCTTTAGG
AGTATTTAAAGGAGATGTTCTGCAGGGAGGGACAGGGTAGGAAGTCAATC
TGGCCAGAACAGAACACTTCAAAATGGTTTTATCTGAACGTTTTGAACCC
TTGACACTGAGTCACTTAAAGGAAGTAGCCAATCCCCAAGGAGTGACTGA
AGACACAGGATATAGATGCTGTAGCTTTGGGGTGCATTTCCCAGTATCTA
GAAGTCGGGTACATATTTTGCCAAACCAGGCTGTCCTGCCTGGGGCAATT
CCAAAGTAGAGGTGGGCGCTGAGCCCAAGCGATCTCTTTTCATGTGCACA
GACCTGTGCCCCTCATACCACCACCCCCAACCTTGGCATCACCCTCACCC
GCTTCCTTTCTGCTGCCCGGACCACTTTTACTACGGGCTACTGCCGCCAC
CGGCTCCTTATGCCACTACCCCCAATTCGCCTTTTTGCN

NACATGAAGTGTGAGGCCGGCGGCGCCTGGTCCGACTAGAGGNGAACATA
GAAGTTCCGAAGAGGCTTTGATTACCAACTGTATGTGTGTGTGTGTGTGT
GTGTGTGTGCGCGCGTGAGCGAGTCGACCCCCCAAAAAAACCCGACCAAT
CTTTATTCACACGAAGACCCACTCCACCTAACAACTCACCCCCCCCCATC
AAACCACCATAATCCAATCAATCCCATCTATAAAATAAACTAACTCTTTT
AACTACATCAAACGTCCAATACCCCAAACCCATTTATTGTACCAATCCCG
AACAAAACCAAATTTTTTTTTTTTTAAACAACCCCACACCCCACCCCCAC
CCCCGAAAATACTCCAATAAAAACCAACCACCCACACGAAAATATTTCCA
TCCCATACACCACATTAATCCCCACAAAAACACAAAATCTTCAAAAAAAA
CTCAATACCCATAACCCAAAACAATTTCCAACTCTACCATTATCAAACCC
CATTTCCATCCCACTCCACACATATTTTCACCTCTACCCCATCATAACTT
TCACCCCTTCTCCATCCTACACTTCAAACAAACTATTCATTAACTCTCCA
CACCCCTTTTTTTCCCCCACACCTGCATACTAAAACCACTTACTCCACTT
TCCCCATATTTCAACCCAACCATACTACCCTTCACCACATCCTCCATTAA
CCTACCACACTCCCATCAATTTTTCCTCCACTTCTTCCCCTTATCTCCCC
AACTTACCATCATTCATTTTTCCAATTCTCCACCTCCATTCTCACTTCCC
TTCCATACCAACACATTCTAATAATT

Query= MSMg01no424_g09.b1 MSMg01no424_g09.b1 CHROMAT_FILE:
MSMg01no424_g09.b1 PHD_FILE: MSMg01no424_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:21 2005
         (458 letters)



>mm_chr13_111346694_111347551
          Length = 858

 Score =  812 bits (420), Expect = 0.0
 Identities = 453/474 (95%), Gaps = 16/474 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttactaaaaggaaaccattgctgctgggagcttggagaattgttatggtccagaattgtt 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttactaaaaggagaccattgctgctgggagcttggagaattgttatggtccagaattgtt 244

                                                                       
Query: 61  aagcttaggggggagagagagagagagag----------------agagagagagagaga 104
           |||||||||||||||||||||||||||||                |||||||||||||||
Sbjct: 245 aagcttaggggggagagagagagagagagagagagagagagagacagagagagagagaga 304

                                                                       
Query: 105 gagagagagagagagcagaaatcggcataaggagatgtggcctgttctgggtaggatgtt 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gagagagagagagagcagaaatcggcataaggagatgtggcctgttctgggtaggatgtt 364

                                                                       
Query: 165 ctcaaaataaccagaaagccccagtgaaggcgttaagcttgagtgttctgtaagatgact 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctcaaaataaccagaaagccccagtgaaggcgttaagcttgagtgttctgtaagatgact 424

                                                                       
Query: 225 aaaagctttaggagtatttaaaggagatgttctgcagggagggacagggtaggaagtcaa 284
           |||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||
Sbjct: 425 aaaagctttaggagtatttaaaggagatgaacagcagggagggacagggtaggaagtcaa 484

                                                                       
Query: 285 tctggccagaacagaacacttcaaaatggttttatctgaacgttttgaacccttgacact 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctggccagaacagaacacttcaaaatggttttatctgaacgttttgaacccttgacact 544

                                                                       
Query: 345 gagtcacttaaaggaagtagccaatccccaaggagtgactgaagacacaggatatagatg 404
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 545 gagtcacttaaaggaagtagccaatccccaaggagtgactgaagacacgggatatagatg 604

                                                                 
Query: 405 ctgtagctttggggtgcatttcccagtatctagaagtcgggtacatattttgcc 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctgtagctttggggtgcatttcccagtatctagaagtcgggtacatattttgcc 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)