Query= MSMg01no425_o09.b1 MSMg01no425_o09.b1 CHROMAT_FILE:
MSMg01no425_o09.b1 PHD_FILE: MSMg01no425_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:14 2005
(584 letters)
>mm_chr13_93524560_93525543
Length = 984
Score = 1046 bits (541), Expect = 0.0
Identities = 577/597 (96%), Gaps = 13/597 (2%)
Strand = Plus / Minus
Query: 1 tagcctcttctaattgcatttcctctccacagggtacacggcatttaacggagttgactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tagcctcttctaattgcatttcctctccacagggtacacggcatttaacggagttgactt 654
Query: 61 tgaagggaccttccacgtaaacacccagacagatgatgactatgctggctttatttttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgaagggaccttccacgtaaacacccagacagatgatgactatgctggctttatttttgg 594
Query: 121 ttaccaagacagctccagcttctatgtagtcatgtggaagcaaacggagcagacatactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttaccaagacagctccagcttctatgtagtcatgtggaagcaaacggagcagacatactg 534
Query: 181 gcaggctacaccgttccgtgcagtagcagaacctggtattcagctcaaggtaatggcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gcaggctacaccgttccgtgcagtagcagaacctggtattcagctcaaggtaatggcagt 474
Query: 241 ttgaatccccatgtcttcttttcttctagacccttcaccttcctttatgtttagagttcc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttgaatccccatgccttcttttcttctagacccttcaccttcctttatgtttagagttcc 414
Query: 301 cctaaaagtcactaaattaatctgagaaacgagtgcagtcaaggagaaacttggctgggg 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cctaaaagtcactaagttaatctgagaaacgagtgcagtcaaggagaaacttggctgggg 354
Query: 361 agccttgagtgacaaccttgcctgccttctgttgagcctgcacctttcaacctatgcaac 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 353 agccttgagcgacaaccttgcctgccttctgttgagcctgcacctttcaacctatgcgac 294
Query: 421 tcatgctgcaaatgtcaggctgagtggggtcaaagaggcggagaaggtttaaggcatacc 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tcatactgcaaatgtcaggctgagtggggtcaaagaggcggagaaggtttaaggcatacc 234
Query: 481 tgaggcagactgtgttaaaagctagctagccaa-------------agggatggactaca 527
|||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 233 tgaggcagaccgtgttaaaagctagctagccaatgtgttcaatcaaagggatggactaca 174
Query: 528 caggaacaacgggctacttctttcactcctgctagggcaggaagcacacatccacag 584
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 173 caggaacaacgggctacttctttcactcctgctagggcaggaagcacacttccacag 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_o09.g1 MSMg01no425_o09.g1 CHROMAT_FILE:
MSMg01no425_o09.g1 PHD_FILE: MSMg01no425_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:14 2005
(477 letters)
>mm_chr13_93270861_93271737
Length = 877
Score = 201 bits (104), Expect = 7e-56
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 ctttgaaggcaaatatagattcctgggaccaagacaactagcaagactagccatatcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgaaggcaaatatagattcctgggaccaagacaactagcaagactagccatatcaac 260
Query: 61 aggctctgagttttactgagagatcctgtgtggtggtttgaatagaaa 108
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 aggctctgagttttactgagagaccctgtgtggtggtttgaatagaaa 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
