Query= MSMg01no426_k10.b1 MSMg01no426_k10.b1 CHROMAT_FILE:
MSMg01no426_k10.b1 PHD_FILE: MSMg01no426_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:16 2005
(444 letters)
>mm_chr13_12553276_12554119
Length = 844
Score = 752 bits (389), Expect = 0.0
Identities = 428/441 (97%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 5 gaattccttaagttcttcc-gtatgacattgaacttgtggtcctcctgcctccacctcgc 63
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gaattccttaagttc-tccagtatgacattgaacttgtggtcctcctgcctccacctcgc 733
Query: 64 agggctggaactacaggggtgcaccccgaccgatttgtgcagagctgggtggaaatcaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agggctggaactacaggggtgcaccccgaccgatttgtgcagagctgggtggaaatcaac 673
Query: 124 ctgggggcttccagcacgtgaggtgagccacaccccaaccccagccagccactcccacag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctgggggcttccagcacgtgaggtgagccacaccccaaccccagccagccactcccacag 613
Query: 184 ccagccagaggtctgcgtgggtgacaggaagagcccaacagccccagctcgcagcactcg 243
||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 612 ccagccataggtctgcgtgtgtgacattaagagcccaacagccccagctcgcagcactcg 553
Query: 244 gacgccccgcccctgcagtcgttctcgcggaaacggacgcggtctgacaccgccctctgc 303
|||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 552 gacgccccgcccctgcagtcgttctcgcggaaacggccgcgggctgaccccgccctctgc 493
Query: 304 ctgtggcggctcggggaaccggacggcgtccgtcaggggacacaagtcggagcaaagcgc 363
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctgtggcggctccgggaaccggacggcgtccgtcaggggacacaagtcggagcaaagcgc 433
Query: 364 ttactaccaccggggtgagtcctggcgactgcgggctcaggggcatcgggataccactgt 423
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 432 ttactaccaccggggtgagtcctggcgactgcgggctcagggacatcgggataccactgt 373
Query: 424 tcctggaccggaacccgagtg 444
||| ||||||||| |||||||
Sbjct: 372 tcccggaccggaatccgagtg 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_k10.g1 MSMg01no426_k10.g1 CHROMAT_FILE:
MSMg01no426_k10.g1 PHD_FILE: MSMg01no426_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:16 2005
(473 letters)
>mm_chr13_12361908_12362782
Length = 875
Score = 810 bits (419), Expect = 0.0
Identities = 459/475 (96%), Gaps = 6/475 (1%)
Strand = Plus / Plus
Query: 1 caggatgcttggtaaaaacacatgcgggattattgccaatatttctcatactgggtcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggatgcttggtaaaaacacatgcgggattattgccaatatttctcatactgggtcaaa 260
Query: 61 tgtgagtgataaacattccgattttaattccccaccttgtgggtcaacttggttcacatc 120
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tgtgagtgataaacattctgattttaattccccacctcgtgggtcaacttggttcacatc 320
Query: 121 ataaaccgaggagaacataggagtgactcgtttgacttcacataactgatgttcttagaa 180
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ataaactgaggagaacataggagtgactcatttgacttcacataactgatgttcttagaa 380
Query: 181 agtggagacccttggctggagagatggcttagccattaaaggttaggctcacaaccagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggagacccttggctggagagatggcttagccattaaaggttaggctcacaaccagaa 440
Query: 241 atataagaaaatggagagaccctttcatgctctggtatttaaaaatatgaaaatacgtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 atataagaaaatggagagaccctttcatgctctggtatttaaaaatatgaaaatatgtca 500
Query: 301 ctgagaggagaaaaaaaaaaac--aacgaaaaagtagggtttggcactgaaggagagaac 358
||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||
Sbjct: 501 ctgagaggagaaaaaaaaacacttaaagaaagagtagggtttggcactgaaggagagaac 560
Query: 359 ttttataaacatatatacttatgggacctcgcctccaagaagccttcacccatgttctgg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttataaacatatatacttatgggacctcgcctccaagaagccttcacccatgttctgg 620
Query: 419 gataagctttactctttcctaagcctctctctatatatatatataaacccctgcc 473
||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 621 gataagctttactctttcctaagcctctctctatacatata----aacccctgcc 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 875
Length adjustment: 10
Effective length of query: 463
Effective length of database: 865
Effective search space: 400495
Effective search space used: 400495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
