NNNAAAANNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCAGGTTCAGCGTTTTTTTGGTTTTTTGTTTGTTTG
TTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACT
CTGTAGACCAGGCTTGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC
TGAGTGCTGGGACTAAAGGCATGCGCCACCACGCCCGGCCTTCAGGTTCA
GTTTTAAAGATTAGGAAAGCTTTTAATTGTATAGCTTGCCAAGATCCATT
AATGAGGCTACTGAGAACTACTGTAAAGATACACGGCAAAGTGGGACTTG
CTCTGAAGTGTCTCTAGTGCCCGTTGCATTGTGGCTTCTTTGATCTGGTG
AGTAAGGCGAGGAGCGGCGCTGTGGCGGCGCTGTTTTGTTGACTTAATGG
CAGCTATTTTGAGGACGCAGAGTTAGTTCTCAGTTGACTTTTCACAGGTG
GACCTTCTGTGACTCACTTTTACAGAGACAGTCCGATGCAGAAGACTTTT
CCTATCCTGAGCTTGTGAAGGTGGTGTGGNATAAGGGGGGTAATTTNNGG
AAAAGGCCCTTCCCTTCCTTGAACCGTAGTTTTGTAAATTTAAATTAAAT
TTTTTTTGGTTTACTTATCCTTGTTATTGTCTCTAAAGTCCCATATAATT
TTTCTTACCTCCTTCTAAAGGTGTTGAACCACTCATGGTTTTCTGCCA

NNNAAAANNCCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTCTAAGTACTG
TATGAAAAACTTATTTGGTAGAGTCGTAGACACTGGGTGTCAAACCCGAG
CCAGTAAATTTGAGAGGCTTTGAAAGTCCTACAGGCACAATGGTGAATTT
CTCTGAAGAGATATTACAAAATCAGATGAAAGCTTCCTTCTTTATCTGTT
AAAATAGATTGGTAGCAATGGGGAAGGCCAGATTTTTCCTCTTCTGATTC
ACTTAAGCTCGGCACATTGGTGGACTACATCGATACCCTTAAGCAAATAC
TGACAGGAGGCGTACACTTAATAAGACGCAGACAACTCCAGGGGAGGGAC
AGAAGCTCATCTATTGCCACCAGTTGCAACCAGGGTAAAGAACCACTGTG
GCCAGGTCTGACATTTTTCTGTGCTGGGGCTTGAACCCTGAGTCATATGA
TGCTAGGTGAGCTCTCTGAGCTACACAATTAGCTGTCAACTCTCACTTCG
AAGGGAAGCTGTAAATCGTGTGTGTACGTGTGAAGTTGTGAATGGGAAAA
TTGTTTTGAAAAGTTTGCTTATGNATTTTAAAAGAGACCTGAAAAATTCA
TATCCCGCCCGTTTTCTGGATTCAAGGTGGANCAAGGGGCACTTAAAAAA
AAATCGCCCGACCTTTCCTTATTCGAGAGGGGTT

Query= MSMg01no427_e17.b1 MSMg01no427_e17.b1 CHROMAT_FILE:
MSMg01no427_e17.b1 PHD_FILE: MSMg01no427_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:07 2005
         (481 letters)



>mm_chr13_120260305_120261185
          Length = 881

 Score =  779 bits (403), Expect = 0.0
 Identities = 446/461 (96%), Gaps = 3/461 (0%)
 Strand = Plus / Plus

                                                                       
Query: 21  tttttttggttttttgtttgtttgttttcaagacagggtttctctgtgtagccctggctg 80
           |||||||  |||||| ||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 224 ttttttt--tttttt-tttgttttttttcaagacagggtttctctgtgtagctctggctg 280

                                                                       
Query: 81  tcctggaactcactctgtagaccaggcttgcctcgaactcagaaatccgcctgcctctgc 140
           |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 281 tcctggaactcactttgtagaccaggctggcctcaaactcagaaatccgcctgcctctgc 340

                                                                       
Query: 141 ctcctgagtgctgggactaaaggcatgcgccaccacgcccggccttcaggttcagtttta 200
           |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 341 ctcccgagtgctgggactaaaggcgtgcgccaccacacccggccttcaggttcagtttta 400

                                                                       
Query: 201 aagattaggaaagcttttaattgtatagcttgccaagatccattaatgaggctactgaga 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aagattaggaaagcttttaattgtatagcttgccaagatccattaatgaggctactgaga 460

                                                                       
Query: 261 actactgtaaagatacacggcaaagtgggacttgctctgaagtgtctctagtgcccgttg 320
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 actactgaaaagatacacggcaaagtgggacttgctctgaagtgtctctagtgcccgttg 520

                                                                       
Query: 321 cattgtggcttctttgatctggtgagtaaggcgaggagcggcgctgtggcggcgctgttt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cattgtggcttctttgatctggtgagtaaggcgaggagcggcgctgtggcggcgctgttt 580

                                                                       
Query: 381 tgttgacttaatggcagctattttgaggacgcagagttagttctcagttgacttttcaca 440
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgttgacttaacggcagctattttgaggacgcagagttagttctcagttgacttttcaca 640

                                                    
Query: 441 ggtggaccttctgtgactcacttttacagagacagtccgat 481
           ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 641 ggtggaccttctgtgactcacttctacagagacagcccgat 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)