Query= MSMg01no428_d22.b1 MSMg01no428_d22.b1 CHROMAT_FILE:
MSMg01no428_d22.b1 PHD_FILE: MSMg01no428_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:22 2005
(332 letters)
>mm_chr13_57116731_57117461
Length = 731
Score = 596 bits (308), Expect = e-175
Identities = 326/332 (98%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 1 taccaaaccccagactccagccagacctactctatccatccattttcctagactaatctc 60
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 531 taccaaa-cccagactccagccagacccactctatccatccattttcctagactaatctc 473
Query: 61 aaatttctttctcctaaatgggcatttgctgggtgaccttaataccttgccaccatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 472 aaatttctttctcctaaatgggcatttgctgggtgaccttaataccttgccacgatggct 413
Query: 121 tctccctgttcttgaaccttcccgttcagaccctgtgcttcctaaacttggtcctaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tctccctgttcttgaaccttcccgttcagaccctgtgcttcctaaacttggtcctaaact 353
Query: 181 tgaatgcttttatttaaacacgcccaggttccaagtcccaaagctaagcttacagtgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 352 tgaatgcttttatttaaacacgcccaggttccaagtcccaaagctaagctttcagtgttg 293
Query: 241 ctacaatctccttcgtgttaaaaatgtaccgtgaaatagtgaaggccgattccggtttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 292 ctacaatctccttcgtgttaaaaatgtaccgtgaaatagtgaaggccgattccggttagc 233
Query: 301 gtccaactgtgtctcctcacttctatgtctgg 332
||||||||||||||||||||||||||||||||
Sbjct: 232 gtccaactgtgtctcctcacttctatgtctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_d22.g1 MSMg01no428_d22.g1 CHROMAT_FILE:
MSMg01no428_d22.g1 PHD_FILE: MSMg01no428_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:22 2005
(564 letters)
>mm_chr13_57054077_57055039
Length = 963
Score = 1017 bits (526), Expect = 0.0
Identities = 556/568 (97%), Gaps = 5/568 (0%)
Strand = Plus / Plus
Query: 1 ttcttcccccttgtttggaagtccatgtggctatgcaaaggatctcttgctaatttagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttcttcccccttgtttggaagtccatgtggctatgcaaaggatctcttgctaatttagct 256
Query: 61 acagtccattattttttcttattggtataaagaaattttcaaagagtggttggctcaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acagtccattattttttcttattggtataaagaaattttcaaagagtggttggctcaatt 316
Query: 121 ggattatcatgcttatcatgccatttccccttaaaggcctttttgttgttg----ttgtt 176
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 ggattatcatgcttatcatgccatttccccttaaaggcctttttgttgttgttgtttgtt 376
Query: 177 tgtttgtttgtttgtttaaaaggctttaatttgccaagtctgtacttttagctcttggct 236
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 377 tgtttgtttgtttgtttaaaaggctttaatttgccaagtctgtac-tttagttcttggcc 435
Query: 237 atcctgtatccctgtcatcttgggcctttgaaaatcacctgatttcccagcaagccctta 296
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 436 atcctgtatccctgtcaacttgggcctttgaaaatcacctgaattcccagcaagccctta 495
Query: 297 tggcttaaggagcctggacacatttatgaggctctccacgtgaccaacacagagtgtcac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tggcttaaggagcctggacacatttatgaggctctccacgtgaccaacacagagtgtcac 555
Query: 357 caaatgcagcagtgtgtctggagaatgctttgagttttttgagaaggcaaggtcatttca 416
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 556 caaatgcagcagtgtgtctggagaatgctgtgagttttttgagaaggcaaggccatttca 615
Query: 417 gtgttttgtcgtgaaccctcacttatgtcttttaggtagatcctcctaaacctcttattt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtgttttgtcgtgaaccctcacttatgtcttttaggtagatcctcctaaacctcttattt 675
Query: 477 aacttttcctgaggcagccataaatataagccaagaattagcagatatgaggaagaaaca 536
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 676 aacttttcctgaggcagccataaatataagccgagaattagcagatatgaggaagaaaca 735
Query: 537 gagaaacagctctcagaccctttctcaa 564
||||||||||||||||||||||||||||
Sbjct: 736 gagaaacagctctcagaccctttctcaa 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 963
Length adjustment: 10
Effective length of query: 554
Effective length of database: 953
Effective search space: 527962
Effective search space used: 527962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
