Query= MSMg01no429_h13.b1 MSMg01no429_h13.b1 CHROMAT_FILE:
MSMg01no429_h13.b1 PHD_FILE: MSMg01no429_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:58 2005
(557 letters)
>mm_chr13_3672551_3673508
Length = 958
Score = 1035 bits (535), Expect = 0.0
Identities = 550/555 (99%), Gaps = 1/555 (0%)
Strand = Plus / Minus
Query: 4 ggaatt-aaatgttttagagtttgaggagcctgctgtggtgagttctcatggattggagt 62
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 758 ggaattcaaatgttttagagtttgaggagcctgctgtggtgagttgtcatggattggagt 699
Query: 63 tgagagactgtctaatcccttcgctgtcagggagagtccttgttaggaaaatgagctaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tgagagactgtctaatcccttcgctgtcagggagagtccttgttaggaaaatgagctaaa 639
Query: 123 tttgagctctagactggcccagacccctgactttcagtggcagggggaccatggggagag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tttgagctctagactggcccagacccctgactttcagtggcagggggaccatggggagag 579
Query: 183 caatgagatcatgtctgcagaggccctccagccccatggaaaaggatccttccatcactt 242
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 578 taatgagatcatgtctgcagaggccccccagtcccatggaaaaggatccttccatcactt 519
Query: 243 cttagaaaagccttagccctccagcgcatttctgctcacaccatctcaattttcctgtct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cttagaaaagccttagccctccagcgcatttctgctcacaccatctcaattttcctgtct 459
Query: 303 ggctacagccaccaacagcagcctgccgcagcctgccaaatttccatttacttggcctct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggctacagccaccaacagcagcctgccgcagcctgccaaatttccatttacttggcctct 399
Query: 363 ggcctttccatgctgtttctcccctcaggactagatgcaggtctgagtacatgagcagag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggcctttccatgctgtttctcccctcaggactagatgcaggtctgagtacatgagcagag 339
Query: 423 tttttaaacgtgtggtccccaaccaatcatttaatccttcagataacttcaataaaggat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttttaaacgtgtggtccccaaccaatcatttaatccttcagataacttcaataaaggat 279
Query: 483 gcctgggtaactgaggatgcatggataggtttctttttctaccctcatgcagtccctcta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gcctgggtaactgaggatgcatggataggtttctttttctaccctcatgcagtccctcta 219
Query: 543 tctgtctggatgtag 557
|||||||||||||||
Sbjct: 218 tctgtctggatgtag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space: 518556
Effective search space used: 518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_h13.g1 MSMg01no429_h13.g1 CHROMAT_FILE:
MSMg01no429_h13.g1 PHD_FILE: MSMg01no429_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:58 2005
(353 letters)
>mm_chr13_3521417_3522169
Length = 753
Score = 652 bits (337), Expect = 0.0
Identities = 349/353 (98%)
Strand = Plus / Plus
Query: 1 ctggccctcgtcacacatgcaggagaaacaggcaaagccacctacagagaagatgtggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggccctcgtcacacatgcaggagaaacaggcaaagccacctacagagaagatgtggaa 260
Query: 61 agaggagctgaagttagagacagttttctgattcctcctctcttcctctacccagccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaggagctgaagttagagacagttttctgattcctcctctcttcctctacccagccctt 320
Query: 121 aagaagtacagaagattcaatctagggcctccagcatatgagagcaacactctaccactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaagtacagaagattcaatctagggcctccagcatatgagagcaacactctaccactg 380
Query: 181 agctgttgcccaggtttcctaagtctcaatttcagctctttctgcatgtttgttttttct 240
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgctgcccaggtttcctaagtcccaatttcagctctttctgcatgtttgttttttct 440
Query: 241 tcctttcttcaaagagtaatgcaccattctgctcttaaaagatacacaacctagaaacaa 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctttcaacaaagagtaatgcaccattctgctcttaaaagatacacaacctagaaacaa 500
Query: 301 ttcagagcagaaaacacccagttagaagacagggtggaccagtcctagcactc 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcagagcagaaaacacccagttagaagacagggtggaccagtcctagcactc 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
