XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATGT
TACAGTCTATCATTGAGGGGAAGTCAAGGCAGGAACTCAAACAGCCAGTC
ACATCTCATTCACAATGAAGAGTAGAGAGACATAAATGTGGGAGGGACTA
TTTTCATACCTGCTTGCTGTCACCTAAATTTCTTGTCTCATACTATTCAG
GAGCCCCTGTGTAGGGAATGGTGCCACCCACAATGGTCTGGATTTTCATA
TATTGATTAAAAATCAAGACAGTCTCCCATGGATAATCTCACAGGATGAC
CTGATCTAGATAATGCTACATTAAGTCTCTTGGCCAAGACAATTCACACT
CCATGTTTGTGCGTGCATGCGTACTTGTGCGCATGCGTGCGTGTGACTTT
TTCTTGAGAGAGAAAGAGAGCAAAAGAGCATGAAGAAACATAAAGTTGGG
TGGGTAGGGAGGATCCTGGGAGGAGTTTNNNNNNNNNNNNNNNNGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTCATGATTCAACCCACCATTCAAGTTCTT
TTAAAGTAAATGGCACCATGAATATGGAAAATGACTCACAAGGGTAACTG
TAGTCAGTCAGAGAGCTAACCCAGCCCGAAGGAGGGAGGCTGCAAGTAAG
CAGTCTGACCTAGAAGACAGTTCAGAAAAGGTCAGTTTCCTGTCAGCAAA
ATCTGGTTGGCATCCACAATAGTGTCTGGGTTTAGTGGTTGTTTATGGGA
TGGATCCCCAGGTGGGACAGTCTCTGGATGGTCATTCCTTTAGTCACTGC
TCTAAACTTTGTCTCTGTAACTCCTTCCATGAGTATTTTGTTCTAAGAAG
GATCAAAGTATCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTT
TTGCAAATTGTATCTGTGAGGCTCTGCCAGTGCCTGGCAAATACAAGTGG
ATGCTCACAGTCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGGAGC
TAGGGAAAGTACCCAAGGAGCTGAAGGAGTTTGCAGGCCCCTANGAGGAA
CAACCATATGAAGTAACCAGTATCGCCAGAGATCCCTGGGACTAAACCAC
CAACCAAAGAAAACAAATGGTGGGACTCTTGGCTCTAGCTGCCTATGTAA
AAGAAGACCCCCTAATCCGTCCCTCC

Query= MSMg01no429_n19.g1 MSMg01no429_n19.g1 CHROMAT_FILE:
MSMg01no429_n19.g1 PHD_FILE: MSMg01no429_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:28 2005
         (519 letters)



>mm_chr13_8644871_8645789
          Length = 919

 Score =  988 bits (511), Expect = 0.0
 Identities = 519/523 (99%), Gaps = 4/523 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcatgattcaacccaccattcaagttcttttaaagtaaatggcaccatgaatatggaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcatgattcaacccaccattcaagttcttttaaagtaaatggcaccatgaatatggaaa 260

                                                                       
Query: 61  atgactcacaagggtaactgtagtcagtcagagagctaacccagcccgaaggagggaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgactcacaagggtaactgtagtcagtcagagagctaacccagcccgaaggagggaggc 320

                                                                       
Query: 121 tgcaagtaagcagtctgacctagaagaca--gttcagaaaaggtcagtttcctgtcagca 178
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 321 tgcaagtaagcagtctgacctagaagacatagttcagaaaaggtcagtttcctgtcagca 380

                                                                       
Query: 179 aaatctggttggcatccacaatagtgtctgggtttagtggttgtttatgggatggatccc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatctggttggcatccacaatagtgtctgggtttagtggttgtttatgggatggatccc 440

                                                                       
Query: 239 c--aggtgggacagtctctggatggtcattcctttagtcactgctctaaactttgtctct 296
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccaggtgggacagtctctggatggtcattcctttagtcactgctctaaactttgtctct 500

                                                                       
Query: 297 gtaactccttccatgagtattttgttctaagaaggatcaaagtatccacactttggtctt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaactccttccatgagtattttgttctaagaaggatcaaagtatccacactttggtctt 560

                                                                       
Query: 357 ccttcttcttgagtttcatgtgttttgcaaattgtatctgtgaggctctgccagtgcctg 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttcttcttgagtttcatgtgttttgcaaattgtatctgtgaggctctgccagtgcctg 620

                                                                       
Query: 417 gcaaatacaagtggatgctcacagtcatccattggacagagcacagggtccccaatgaag 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaaatacaagtggatgctcacagtcatccattggacagagcacagggtccccaatgaag 680

                                                      
Query: 477 gagctagggaaagtacccaaggagctgaaggagtttgcaggcc 519
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagctagggaaagtacccaaggagctgaaggagtttgcaggcc 723


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)