Query= MSMg01no430_h16.b1 MSMg01no430_h16.b1 CHROMAT_FILE:
MSMg01no430_h16.b1 PHD_FILE: MSMg01no430_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:21 2005
(394 letters)
>mm_chr13_7187283_7188076
Length = 794
Score = 688 bits (356), Expect = 0.0
Identities = 380/388 (97%)
Strand = Plus / Plus
Query: 7 gaattctattctatttcaagtgatatgttgattagacgtacagactgttccatacttcac 66
||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 207 gaattctattctagttcaagtgacatgttgattagacatacagactgttccatacttcac 266
Query: 67 ccctgcaactcctgtgaaacttgcttttaattaactagacagtgacctaggtataaaatt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccctgcaactcctgtgaaacttgcttttaattaactagacagtgacctaggtataaaatt 326
Query: 127 ggaagcactgcacttatgcatgacattgtgaatacacatttttataatgtttgagttttt 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 327 ggaagcactgcacttatgcatgacattgtgaatacacatttttataatgtttgaattttt 386
Query: 187 agccaagggctagagatgtgactcagagtgtcctcctagaatatgtggaccctgttttct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agccaagggctagagatgtgactcagagtgtcctcctagaatatgtggaccctgttttct 446
Query: 247 tctccagaaatgaaatgggtggaaaagaaatgatttaaaaagaaagcaaagcaaaactta 306
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 447 tctccagaaatgaaatgggtggaaaagaaatgaaggaaaaagaaaggaaagcaaaactta 506
Query: 307 tcaaatgcttccaaatatttgaaggcataaaagcttttatgttgcggtaattctccaacc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcaaatgcttccaaatatttgaaggcataaaagcttttatgttgcggtaattctccaacc 566
Query: 367 caaataagtccaggcaaagaaaacataa 394
||||||||||||||||||||||||||||
Sbjct: 567 caaataagtccaggcaaagaaaacataa 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_h16.g1 MSMg01no430_h16.g1 CHROMAT_FILE:
MSMg01no430_h16.g1 PHD_FILE: MSMg01no430_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:21 2005
(302 letters)
>mm_chr13_7325657_7326358
Length = 702
Score = 431 bits (223), Expect = e-125
Identities = 288/321 (89%), Gaps = 19/321 (5%)
Strand = Plus / Minus
Query: 1 tctcattaagataatgtgcatatgcataaagtgaattcagtattaggaagtcttgatgaa 60
|||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||
Sbjct: 390 tctcattaagataatgtgcaaatgcataaaatgaattcagtattaagaagtcttgatgaa 331
Query: 61 cctaagatgacacaaaactgtgttagtcaatttggtttaccagaacagagtttcagactg 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 330 cctaagacgacacaaaactgtgttagtcaatttggtttaccagaacagagtttcagcctg 271
Query: 121 agcggaattgcttttgggaactggaagactccattagggagcacttcagcagcgggagc- 179
||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 270 agcggaattgcttctgggaactggaagactgcattagggagcacttcagcagcgggagct 211
Query: 180 ----------------acttcagcagcagtgcttcctgctgatgacactcttagaccttt 223
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cttcagcagcgggagcacttcagcagcagtgcttcctgctgatgacactcttagaccttt 151
Query: 224 ctatgttgtacatggtagaaaactgtttt--aaactaaggtctctctagtccccactatt 281
|| |||||||||||||||||| || | | |||||||||||||||| ||||||||||||
Sbjct: 150 ctttgttgtacatggtagaaagctatgtaggaaactaaggtctctctggtccccactatt 91
Query: 282 aaaatattttgctctttttgt 302
||||||||||| |||||||||
Sbjct: 90 aaaatattttgttctttttgt 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
