Query= MSMg01no430_o07.b1 MSMg01no430_o07.b1 CHROMAT_FILE:
MSMg01no430_o07.b1 PHD_FILE: MSMg01no430_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:58 2005
(432 letters)
>mm_chr13_110754138_110754964
Length = 827
Score = 774 bits (400), Expect = 0.0
Identities = 422/432 (97%), Gaps = 5/432 (1%)
Strand = Plus / Minus
Query: 1 gtagaaacagaaactgttgcaagcttcatgaaagccttaggtcttattcttcctgaccaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 627 gtagaaacagaaactgttgcaagcttcgtgaaagccttaggtcttattcttcctgaccaa 568
Query: 61 ctcagctgattcttccaccgatcttgtctagtttcttggacaagcacatgccagcccatg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 567 ctcagctgattcttccaccgatcttgtctagtttcttggacaagcacatgtcagcccatg 508
Query: 121 atcagccgaagctcctatacatgtctctagagattttttttgtgtgtgtgtgcaataata 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 507 atcagccgaagctcctatacatgtctctagagatttttttt-----tgtgtgcaataata 453
Query: 181 tactcttcctcaccttcagctttttcaccctccttagactcccaatgtgtttcctccatg 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tactcttccccaccttcagctttttcaccctccttagactcccaatgtgtttcctccatg 393
Query: 241 caatgaaaaggtgaagctctttggtaccccccaacactgtaacccatagtacagcctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 caatgaaaaggtgaagctctttggtaccccccaacactgtaacccatagtacagcctgaa 333
Query: 301 catttggtctagtacctctaccccaatctctaccacagcctgagaactctatcacaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 catttggtctagtacctctaccccaatctctaccacagcctgagaactctatcacaactc 273
Query: 361 ccaccaatccacagcgcatcctgtgaactctgtctggtaatgcctcctacccctccaccc 420
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 272 ccaccaatccacagcgcatcctgggaactctgtctggtaacgcctcctacccctccaccc 213
Query: 421 tgcaacctgtat 432
||||||||||||
Sbjct: 212 tgcaacctgtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 827
Length adjustment: 9
Effective length of query: 423
Effective length of database: 818
Effective search space: 346014
Effective search space used: 346014
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_o07.g1 MSMg01no430_o07.g1 CHROMAT_FILE:
MSMg01no430_o07.g1 PHD_FILE: MSMg01no430_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:58 2005
(377 letters)
>mm_chr13_110622576_110623352
Length = 777
Score = 721 bits (373), Expect = 0.0
Identities = 376/377 (99%)
Strand = Plus / Plus
Query: 1 actaggtagagttggctgaacttgaactcaagataaatctgtccctgcctcgtaagagct 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 actaggtagagttggctgaacttgaactcaagataaatctgcccctgcctcgtaagagct 260
Query: 61 ggcattgagtcttgtgcctcccaccgtatatcctgggcttagtacatttttgactcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcattgagtcttgtgcctcccaccgtatatcctgggcttagtacatttttgactcagag 320
Query: 121 aacgccccagtttctcttgcatatatgagaacttggttgcacagtttttttcactatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacgccccagtttctcttgcatatatgagaacttggttgcacagtttttttcactatttg 380
Query: 181 ttctgctcctcgctccacctacccagccaagagattcagccagatcagggacactccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgctcctcgctccacctacccagccaagagattcagccagatcagggacactccaca 440
Query: 241 gccttttggttttcgcaaattgtggcccttgtttctgccaaattctctttggatttagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccttttggttttcgcaaattgtggcccttgtttctgccaaattctctttggatttagag 500
Query: 301 aggtaaaatgtaggtggaggacacactcaaacagccagcttttgaaaagggaggtctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggtaaaatgtaggtggaggacacactcaaacagccagcttttgaaaagggaggtctcag 560
Query: 361 ccatgaattgggattct 377
|||||||||||||||||
Sbjct: 561 ccatgaattgggattct 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
