Query= MSMg01no432_g16.b1 MSMg01no432_g16.b1 CHROMAT_FILE:
MSMg01no432_g16.b1 PHD_FILE: MSMg01no432_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:08 2005
(469 letters)
>mm_chr13_57459824_57460692
Length = 869
Score = 893 bits (462), Expect = 0.0
Identities = 465/466 (99%)
Strand = Plus / Plus
Query: 4 ggaattccagcactattaacatttgttcccagcctttctccttctccaactgtaaaccta 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagcacaattaacatttgttcccagcctttctccttctccaactgtaaaccta 263
Query: 64 cattttccgggcgtctcaccagaaacccaatgtatagaaaacaaaagtcctgggctggag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cattttccgggcgtctcaccagaaacccaatgtatagaaaacaaaagtcctgggctggag 323
Query: 124 agatggctcagtggttaagagcactgactgctcttccagaggtcccaagttcatgcccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agatggctcagtggttaagagcactgactgctcttccagaggtcccaagttcatgcccag 383
Query: 184 caaccacatggtggctcacaaccatctgtaatgggatgagatgccctcttctggtgtgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaccacatggtggctcacaaccatctgtaatgggatgagatgccctcttctggtgtgtc 443
Query: 244 tgaagacagcaacagtgtactcatatacataaaacaagtaattctaaaaaatcaaaaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaagacagcaacagtgtactcatatacataaaacaagtaattctaaaaaatcaaaaaca 503
Query: 304 aaaaacaaaagtccttagatccctgtggtacactgcgacgcactgctgttgccagaagtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaaacaaaagtccttagatccctgtggtacactgcgacgcactgctgttgccagaagtt 563
Query: 364 tgagggagccccactggacaccctacagctacaaaggacactgaggttcttagtctcatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgagggagccccactggacaccctacagctacaaaggacactgaggttcttagtctcatt 623
Query: 424 aacaaaaggatttaagaacagaccaaaacagaagcttgaaggaagg 469
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aacaaaaggatttaagaacagaccaaaacagaagcttgaaggaagg 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_g16.g1 MSMg01no432_g16.g1 CHROMAT_FILE:
MSMg01no432_g16.g1 PHD_FILE: MSMg01no432_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:08 2005
(358 letters)
>mm_chr13_57643786_57644544
Length = 759
Score = 679 bits (351), Expect = 0.0
Identities = 357/359 (99%), Gaps = 1/359 (0%)
Strand = Plus / Minus
Query: 1 ggcatatccagggagtggtccattcttgcggttgcttccatgtctccaagctctcagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggcatatccagggagtggtccattcttgcggttgcttccatgtctccaagctctcagttc 500
Query: 61 agttgttgacactccccatctgctagaaagactttgttgttcttccttctcatctgctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agttgttgacactccccatctgctagaaagactttgttgttcttccttctcatctgctaa 440
Query: 121 tggaaggatggaattgatgctttctgaatgtg-ttttttttccaatactgaaagatataa 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 tggaaggatggaattgatgctttctgaatgtgtttttttttccaatactgaaagatataa 380
Query: 180 aaagatgtgagcttccatccgagtctcctttcaaggggaaactgctcttgaagcacgtct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaagatgtgagcttccatccgagtctcctttcaaggggaaactgctcttgaagcacgtct 320
Query: 240 caggttttaacatccttctaggtagaatatctgctttccaggtggcaaggatggcttttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 caggttttaacatccttctaggtagaatatctgctttccaggtggcaaggatggcttttt 260
Query: 300 tttctccatctttcataggaagaggtcttggcgactgaacatcagccactggaaccaac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 259 tttctccatctttcataggaagaggtcttggcgactgaacatcagccactggagccaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 759
Length adjustment: 9
Effective length of query: 349
Effective length of database: 750
Effective search space: 261750
Effective search space used: 261750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
