Query= MSMg01no432_m02.b1 MSMg01no432_m02.b1 CHROMAT_FILE:
MSMg01no432_m02.b1 PHD_FILE: MSMg01no432_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:36 2005
(338 letters)
>mm_chr13_103020441_103021180
Length = 740
Score = 551 bits (285), Expect = e-161
Identities = 326/343 (95%), Gaps = 8/343 (2%)
Strand = Plus / Minus
Query: 1 tcctgtgtgtattgtatttacaaagcatgaaggcgt-----gggtggaagcactcctcac 55
||||||||||||||||||||||||||||||| || | ||||||| |||||||||
Sbjct: 540 tcctgtgtgtattgtatttacaaagcatgaa-gcttacaaa--gtggaagtactcctcac 484
Query: 56 cagctccctgttccaaatacatccatgagccccctgccccagaagaaaacagaatgtgtt 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cagctccctgttccaaatacatccatgagccccctgccccagaagaaaacagaatgtgtt 424
Query: 116 gtgtcacataatttaaaaacagcctgatggttgcccagtctgaccaagtttaaagctttt 175
||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||| ||
Sbjct: 423 gtgtcacataattaaaaaacagcttgatggttgcccagtctaaccaagtctaaagctgtt 364
Query: 176 ccattcaaagaaagtgagaagaaaaagagaaaactagcaaacatgaacgaaacagagcta 235
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 363 ccattcaaagaaagtgagaagaaaaggagaaaactagcaaacatgaacgaaacagagcta 304
Query: 236 accaaagttcactggtcgtctttgttacctttatctcagaacttggctggaagctgtgaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 accaaagttcactggtcgtctttgttacctttatctcagaacttggctggaagctgtgaa 244
Query: 296 ggtatgttttgtttctattccttcaccttttcgtctataggga 338
||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 243 ggtatgttttgtttctattccttcacctttttgtctataggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 740
Length adjustment: 9
Effective length of query: 329
Effective length of database: 731
Effective search space: 240499
Effective search space used: 240499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_m02.g1 MSMg01no432_m02.g1 CHROMAT_FILE:
MSMg01no432_m02.g1 PHD_FILE: MSMg01no432_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:36 2005
(430 letters)
>mm_chr13_102893202_102894031
Length = 830
Score = 787 bits (407), Expect = 0.0
Identities = 425/431 (98%), Gaps = 1/431 (0%)
Strand = Plus / Plus
Query: 1 actgtgtagaccaggctggcct-cgaactcagaaatccacctgcctctggttcctttttt 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 200 actgtgtagaccaggctggccttcgaactcagaaatccacctgcctctggttcctttttt 259
Query: 60 actttctttattttgaagtctatggaatataagatcatgaaacaaaacattttcatattc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actttctttattttgaagtctatggaatataagatcatgaaacaaaacattttcatattc 319
Query: 120 ctgatagaatatgcttttaagctcaaagacagaacataatctcatcttgctttagtgact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgatagaatatgcttttaagctcaaagacagaacataatctcatcttgctttagtgact 379
Query: 180 cagagtcaagaaggaagaatactatggcttggtgtatttaccatctccttagaggattca 239
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 cagagtcaagaaggaggaatactatggcttggtgtattttccatctccttagaggattca 439
Query: 240 ggcgagactataaaaagggatgtgacactatttggtttgaaatgccaggaaaatttagaa 299
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 440 ggcgagactataaaaagggatgtggcactatttggtttaaaatgccaggaaaatttagaa 499
Query: 300 tttattatatattctttttattgttctttaaaaataatcatgcatcacagaatatgggaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttattatatattctttttattgttctttaaaaataatcatgcatcacagaatatgggaa 559
Query: 360 aaatacagagacccatggctagacaatatgcagagtaagaggccttgaaacactgtcctt 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 aaatacagagacccatggctagacaacatgcagagtaagaggccttgaaacactgtcctt 619
Query: 420 aataggatgtc 430
|||||||||||
Sbjct: 620 aataggatgtc 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
