XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAAC
ATATGCATCTTGAAAGTCTGTGAAGTACTTAAAGAAATGTTCAATATCCT
TAATCATCAGGGAAATGCATATCAAATCAACCCTGAGAGTCTACCTTACA
CCAGTCAGAATGGCTAAGGTCAAAAACGCAAGCAATAGCACATGCTGGAG
AGGATGTGGAAAAAGAGGAACATTCTCCATTGATAGTGGGATTGCAAACT
TGGACAAACACTCTAGAAATCAATCTGTCTGTTTCTCAGAAAACTGGAAA
TAGTTCTACCTATATCACCAAGCTATACCACTCCTGGGCATATACCCAAA
AGATGCTCCAACATACCACAAGGTCACATGCTCCACTATGTTCATATCAG
CTTTATTCATAAGAGCCAGAAACTGGAACCAACCCAGATGTCCTTCAACT
GAAGAATGAATACAGAAAATGTGGTTCATTTACACAAATGAATAGTACCC
TACTGTTAAAAACAAGGACTTCAAGCCAGGTGTGGTGGCACACGCCTCTA
ATCCCAGCACTTGTAAGGCAAAGCAGGCGGATTTCTGAGTTTGAGGGCAG
CCCGGCCTACCCAGTGAGGTCCCGGCTTATCCGAAAAAACCCTGTTTCTT
TCCCCTCTCCTATCCTTAACCTTTATCTCTATACCTCCTTACAACCCCTA
AACCCCGGGGCCTTTTGGATTTTTTCCGGTTTGCGGGGGAAACAAAACAT
TTCCN

TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATTATCTCCTTTTTTATTTGACTAGATTTCATA
GGTACATAAATAATAGAGAAATCACTCATATGAAGTATCAAATCCTGTCA
CATTTTATTAGTATTTTAGAAAGTTGTAGTTTGTAATTAGTAGAAAACAT
TGAAACAACTTGATAGCTGCTGGGTGTTGTGCTTCTCTGATACATTTGTT
TTCAATGTTATATTTAAGTCTCCTTAAATACAGTTATATTAATTAAGTCA
TATATTAAGTGGGTAAATACAAGCCACAAATAGGCAAAGCTAAATAAGTA
AACACAATTATGATCTGACTTGTAAATACCTTTTGCTTTCAAGTGCTTTC
TATATGTCTTAGTTGTAGCCTCAACTATTTTTTCATGAAAAAAATGTAAA
ATAGAATGAAAGAAATAAAGTGAATCTGAGATGCTGATATACAATAACAA
AAAGTGTGTGTGTGTGCATGCACACACATGTGCATGTGTGTGGGAGTGNA
TAATTGTGTCTGGTGACAAACACAGAAATGGGTAGATAAAATATTTATTA
TTTCCGGGATTGGGGCCCAGTCTTTTTATGAGGACTAAAATCCTGCGCTT
TTGAAATTAAACCTTTTCTTTAAATTCTCATTCCCCTCACCCGGTTGTAT
TTCCTCCCTTGGTCTTCCCCCTTCCAATAAAATTGCTCCACTTC

Query= MSMg01no433_h17.g1 MSMg01no433_h17.g1 CHROMAT_FILE:
MSMg01no433_h17.g1 PHD_FILE: MSMg01no433_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:35 2005
         (433 letters)



>mm_chr13_81707761_81708595
          Length = 835

 Score =  775 bits (401), Expect = 0.0
 Identities = 426/435 (97%), Gaps = 2/435 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attatctccttttttatttgactagatttcataggtacataaataatagagaaatcactc 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 attatctccttttttatttgactagatttcatacgtacataaataatagagaaatcactc 260

                                                                       
Query: 61  atatgaagtatcaaatcctgtcacattttattagtattttagaaagttgtagtttgtaat 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 atatgaagtatcaaatcctgtcacattttattagtattttagaaaattgtagtttgtaat 320

                                                                       
Query: 121 tagtagaaaacattgaaacaacttgatagctgctgggtgttgtgcttctctgatacattt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tagtagaaaacattgaaacaacttgatagctgctgggtgttgtgcttctctgatacatgt 380

                                                                       
Query: 181 gttttcaatgttatatttaagtctccttaaatacagttatattaattaagtcatatatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gttttcaatgttatatttaagtctccttaaatacagttatattaattaagtaatatatta 440

                                                                       
Query: 241 agtgggtaaatacaagccacaaataggcaaagctaaataagtaaacacaattatgatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgggtaaatacaagccacaaataggcaaagctaaataagtaaacacaattatgatctg 500

                                                                       
Query: 301 actt--gtaaataccttttgctttcaagtgctttctatatgtcttagttgtagcctcaac 358
           ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 acttttgtaaataccttttgctttcaagtgctttctatatgtctcagttgtagcctcaac 560

                                                                       
Query: 359 tattttttcatgaaaaaaatgtaaaatagaatgaaagaaataaagtgaatctgagatgct 418
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttttttcatgaaaaaaatgtaaaatagaatgaaagaaataaagtgaatctgagatgct 620

                          
Query: 419 gatatacaataacaa 433
           ||||| |||||||||
Sbjct: 621 gatatgcaataacaa 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 835
Length adjustment: 9
Effective length of query: 424
Effective length of database: 826
Effective search space:   350224
Effective search space used:   350224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)