Query= MSMg01no433_i03.b1 MSMg01no433_i03.b1 CHROMAT_FILE:
MSMg01no433_i03.b1 PHD_FILE: MSMg01no433_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:37 2005
(494 letters)
>mm_chr13_96684907_96685800
Length = 894
Score = 955 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 1 ccccattttttaatggggttatttgattttctgaagtccacctcagaagctatttctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccattttttaatggggttatttgattttctgaagtccacctcagaagctatttctaaa 260
Query: 61 ggaaggtagcacaacacctggcttcaagtctaccaacttaactgtttcatctaagaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaggtagcacaacacctggcttcaagtctaccaacttaactgtttcatctaagaactt 320
Query: 121 catagaaacatctggaataacgtttgatcatatttctgggcactgtggcacgaccaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catagaaacatctggaataacgtttgatcatatttctgggcactgtggcacgaccaaatt 380
Query: 181 aacacatgaaattaaccaacattttagaagtgactagccctattttatttttactgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacacatgaaattaaccaacattttagaagtgactagccctattttatttttactgattt 440
Query: 241 tttttaacttgtttacatttgagtttttgagacagggcctcacaattatagctcaagttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttaacttgtttacatttgagtttttgagacagggcctcacaattatagctcaagttg 500
Query: 301 gccttcaaccaaagatccttccatctcagcttcccaaatactgtgattatgggtatatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccttcaaccaaagatccttccatctcagcttcccaaatactgtgattatgggtatatgt 560
Query: 361 tttcacccccagaaacttaccctcattttgtatgttattagtatcagaagacatagcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcacccccagaaacttaccctcattttgtatgttattagtatcagaagacatagcagc 620
Query: 421 tgggactgggaaggccttgaggaagctggtaccagagaaaaggcagtatactcaggattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgggactgggaaggccttgaggaagctggtaccagagaaaaggcagtatactcaggattt 680
Query: 481 tggatttccttaag 494
||||||||||||||
Sbjct: 681 tggatttccttaag 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_i03.g1 MSMg01no433_i03.g1 CHROMAT_FILE:
MSMg01no433_i03.g1 PHD_FILE: MSMg01no433_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:37 2005
(452 letters)
>mm_chr13_96868928_96869779
Length = 852
Score = 731 bits (378), Expect = 0.0
Identities = 435/454 (95%), Gaps = 4/454 (0%)
Strand = Plus / Minus
Query: 1 ttgctttttccaagctctgtgtggaacttgtgcatcaataaccttcttggtcccaaagct 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ttgctttttccaagctctgtggggaacttgtgcatcaataaccttcttggtcccaaagct 593
Query: 61 gcttctccctagagccatagagtatctatggtgatgtttagggaggctctgg-ccctcct 119
||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||
Sbjct: 592 gcttctccctagagccatagagtatctatggcgatgtttggggaggctctggcccctcct 533
Query: 120 ttctggagtctacaagctagggaaacatggctttgggtattccacagggacagtgctctg 179
|||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 532 ttctggagaccacaagctagggaaacatggcattgggtattccacagggacagtgctctg 473
Query: 180 gggattttgtctctgtgctcaggtgtggcccaagtaaacacaggcagctgcatttgtggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gggattttgtctctgtgctcaggtgtggcccaagtaaacacaggcagctgcatttgtggc 413
Query: 240 cactttcaggaacctggcaaaatgaaatatttaccaagtaaaagttagacaaagcaaaat 299
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 412 cactttcaggaacctggcaaaatgaaacatttaccaagtaaaagttagacaaagcaaaag 353
Query: 300 gaaaccatgagatactgagggggggaaaaagcacaccagctcacctgttgacattccagg 359
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 352 gaaaccatgagatactgaggggga-aaaaagcacaccagctcacctgttgaaattcctgg 294
Query: 360 ggcttaactggggtctggggaagttcttgcc-tccaatcagggcgatgcaaaggaggcag 418
||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||
Sbjct: 293 ggcttaactggggtctggggaggttcttgccgtc-aatcagggtgatgcaaaggaggcag 235
Query: 419 aggtgattctctggttatgctttcaaattgcacc 452
|||||||||||||| |||||||||| ||||||||
Sbjct: 234 aggtgattctctggctatgctttcacattgcacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
